Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq307809 210 4e-49 >seq307809 Length=2175 Score = 210 bits (232), Expect = 4e-49 Identities = 515/770 (67%), Gaps = 17/770 (2%) Strand=Plus/Minus Query 35091 AGGGAGAACATCAATAT-TTGAACCTAGTCAGGGAGATCCTAGAAAGAGGAGTGAAGAAG 35149 ||| |||||| |||||| ||||| || | | | | || || |||| | | || Sbjct 1368 AGGAAGAACAGCAATATCTTGAAG-TAATACGACTGCTTCTTGATCAAGGATTTACAAAA 1310 Query 35150 GACGATAGAACTGGAACAGGAACTCTATCCATTTTTGGACCCCAAATGAGGTTCTCTCTT 35209 || ||| | || ||||| || || | || | ||||| | ||||||||| ||| Sbjct 1309 GAAGATCGTACAGGAACTGGTACATTGTCAGTGTTTGGTCAAATGATGAGGTTCAGTCTC 1250 Query 35210 CGAGACGACACTATTCCAGTTCTCACTACCAAGAAAATTTTCTGGAGAGGAGTTGTGGAA 35269 ||| || || |||| |||| || || ||| | ||||||| ||| ||||||||| Sbjct 1249 CGAAACT---CTTTTCCTCTTCTGACAACAAAGCGCGTCTTCTGGAAAGGCGTTGTGGAA 1193 Query 35270 GAACTCTCGTGGTTCATCAGGGGCAATACAGACGCCAAAGAATTGGCCAAGAAGAAGATA 35329 || || | ||||||||| | || ||| | ||||| || ||||| |||| || | Sbjct 1192 GAGCTGTTGTGGTTCATTCGAGGATCAACAAATGCCAAGGAGTTGGCTGAGAAAAATGTC 1133 Query 35330 CACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGATAGA 35389 ||||||||| |||| ||||| || || | ||| | |||| | || ||| ||||| | Sbjct 1132 CACATCTGGGACGCCAATGGCTCACGAGCATTCCTCGACAAAATTGGTTTAAACGATCGT 1073 Query 35390 GCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATA- 35448 | || || || | ||||| || || || || || |||||||||| || ||||| || Sbjct 1072 GAGGAAGGCGACCTTGGACCGGTGTATGGTTTTCAGTGGCGTCATTCAGGCGCTGATTAC 1013 Query 35449 TGATACCTGTTCTTC-CGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAA 35507 | || || | || ||||||||||| ||||| | ||||| | || | | Sbjct 1012 AAAGACATG--CATCATGATTATACTGGGCAGGGTGTGGATCAGCTAAAAGATGTGATTG 955 Query 35508 AGACCCTGAGAGAAAAT---CCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTA 35564 ||| || ||| | ||| |||| ||| | ||||||||| || |||||||| | Sbjct 954 AGA---AGATTAAAAGTTCACCAAATGACAGACGAATGATTATGTGTGCGTGGAATCCGA 898 Query 35565 TGGATCTTCACCTTATGGCTCTTCCTCCATGCCACATGACTGCT-CAATTTTATGTGGCT 35623 ||||||| | ||||| || || ||||||||| ||| | || || ||||| || Sbjct 897 AAGATCTTCCCAAAATGGCGCTGCCACCATGCCAC-GCTCTGGTGCAGTTCTATGTTGCC 839 Query 35624 AATGGAGAATTGTCGTGCCAGTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCC 35683 || |||||| | ||||||| |||||| ||||| | |||||| || | || || || Sbjct 838 AACGGAGAACTCTCGTGCCTGTTGTACCAGCGCTCGGCAGATGTTGGTCTCGGTGTTCCA 779 Query 35684 TTCAATATTGCATCATACTCTCTTCTGACTCATCTGATGGCCAGTATGGTGGGTCTAAAA 35743 || || ||||| ||| || | |||| || |||| || | || || |||| | Sbjct 778 TTTAACATTGCCAGCTACGCTTTGTTGACATATATGATTGCTCATGTGACTGGACTAAGA 719 Query 35744 CCGGGAGAGTTTATCCTCACTCTTGGTGACGCACACATTTATAATACCCACATTGAGGTG 35803 || |||||||| |||| || | ||||| | ||||||||| | |||||||| | Sbjct 718 CCAGGAGAGTTCATCCACAACATGGGTGATACTCACATTTATCTGAATCACATTGAACCG 659 Query 35804 TTAAAGAAGCAGTTGTGCCGCGTCCCTAGACCATTCCCTAAGTTGAGGAT 35853 || ||| ||||| | ||| || || ||||| ||| |||| ||| Sbjct 658 TTGAAGGAGCAGCTAAAACGCAAGCCAAGGCCATTTCCTCGCTTGAAGAT 609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 968542782488285