Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_003309.1 Length=53373 Score E Sequences producing significant alignments: (Bits) Value seq532148 214 6e-51 seq643591 138 4e-28 >seq532148 Length=3883 Score = 214 bits (236), Expect = 6e-51 Identities = 267/364 (73%), Gaps = 4/364 (1%) Strand=Plus/Plus Query 31752 GCGTTTCCGATTCGCTTCGTCAGTAGCAGCCAGTCGAGATTTGGCGTGTTGC--TGATCA 31809 || || || || ||||| ||||| |||| |||||| || |||||||| ||| ||||| Sbjct 18 GCATTGCCAATGCGCTTGGTCAGCAGCAACCAGTCAAGGTTTGGCGT--TGCCATGATCG 75 Query 31810 AATCGAAGAGATCGACTCGCCACATCGGATAGACCGCGTTGTCGAACACGTCCGCAAGCG 31869 | || || ||| | ||||| | ||||||||||||||||| || || || Sbjct 76 AGCGCAACAGGTCGGCGCGCCATGCGCTGTCCACCGCGTTGTCGAACACATCGGCCAGGC 135 Query 31870 ACGAGCAAAAGACGCGCTGGCGCCGGCCGCGGGCGGCGAAGAACTGTTCGTGCGCTGCGT 31929 | |||||| || |||||||| | ||| | ||||| ||||| ||| ||| || | Sbjct 136 TGGCGCAAAACACCCGCTGGCGGCAGCCATGCGCGGCAAAGAAGGCTTCATGCTTCGCAT 195 Query 31930 TCCACGCGAGCGGCTTGCGCCAGTTTGCGGCTGACGTGCGACGCCGCGGTGCGCCCGGTC 31989 |||| || ||||||||||||||||| || || ||||| || ||||| ||||| || | Sbjct 196 TCCAGGCCAGCGGCTTGCGCCAGTTGGCAGCGCTGGTGCGCCGGCGCGGGGCGCCAGGGC 255 Query 31990 CCCAGTTCACGGCCGAGCCGCCAGCGAAGCGTGCATTGCGCGCCTCGGCGTAACAGTGGT 32049 |||| || || ||| ||| | | ||||| |||||||| |||||||| || ||||| | Sbjct 256 CCCAATTGACCGCCCGGCCTGCGCCAAAGCGCGCATTGCGTGCCTCGGCATAGCAGTGCT 315 Query 32050 CGCATCCCGGACCGACCTTCTGGCAACCTTCCCACGGGTTGAACGTGTGGTCGCACCATT 32109 |||| || || || ||| |||||||||||||| |||||||| || |||| ||||| Sbjct 316 CGCAGCCGGGGCCTGTCTTTTGGCAACCTTCCCAGGGGTTGAAGGTATGGTGTGTCCATT 375 Query 32110 CGAT 32113 |||| Sbjct 376 CGAT 379 >seq643591 Length=1265 Score = 138 bits (152), Expect = 4e-28 Identities = 102/119 (86%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 31347 CCCCATTGCTTGAATAGGAACGGCACGCCGGCGGCTGCGCACTGGTCGCGCAGCGAGCGA 31406 |||||||||||||| | ||||||||| |||||| | ||| ||||||||||| ||| Sbjct 334 CCCCATTGCTTGAAAAAGAACGGCACCCCGGCGCCCTGGCATTGGTCGCGCAGGCTGCGT 275 Query 31407 GCCCAGTCGGGATGCATCGGGCGGGCGCCGTGGCCGCTTTCGCCGCCGGCGATCACCCA 31465 |||||||| || ||||||||||| |||||| ||||||||||||||||| |||||||||| Sbjct 274 GCCCAGTCCGGGTGCATCGGGCGCGCGCCGGGGCCGCTTTCGCCGCCGACGATCACCCA 216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 167308586843290