Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_003315.1 Length=31508 Score E Sequences producing significant alignments: (Bits) Value seq1374872 111 3e-20 seq1488561 102 2e-17 seq1659527 96.9 7e-16 seq679633 93.3 8e-15 seq646642 86.0 1e-12 >seq1374872 Length=147 Score = 111 bits (122), Expect = 3e-20 Identities = 70/76 (92%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 358 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 417 |||||||||||||||||||||||||||||||| | ||||||| ||||| |||||||||| Sbjct 94 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCTATGGATTAAGAGTCCACTGCTCTACCA 35 Query 418 ACTGAGCTAACGACCC 433 ||||||||||||||| Sbjct 34 GCTGAGCTAACGACCC 19 >seq1488561 Length=182 Score = 102 bits (112), Expect = 2e-17 Identities = 68/76 (89%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 358 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 417 |||||||||||| ||||||||||| ||||||| ||||||||||| ||||||||||| Sbjct 86 TGGTGGGTCGTGCTGGATTCGAACCAGCGACCAATTGATTAAAAGTCAACTGCTCTACCG 145 Query 418 ACTGAGCTAACGACCC 433 |||||||||||||||| Sbjct 146 ACTGAGCTAACGACCC 161 >seq1659527 Length=12102 Score = 96.9 bits (106), Expect = 7e-16 Identities = 68/78 (87%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 358 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 417 |||| || ||| | ||||||||| | ||||||||||||||||||||||||||||||| Sbjct 4118 TGGTAGGACGTACAAGATTCGAACTTGTGACCAACGGATTAAAAGTCCGCTGCTCTACCA 4059 Query 418 ACTGAGCTAACGACCCAA 435 |||||||||||| ||||| Sbjct 4058 ACTGAGCTAACGTCCCAA 4041 >seq679633 Length=100 Score = 93.3 bits (102), Expect = 8e-15 Identities = 68/79 (86%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 356 ATTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTAC 415 |||||||||||||| || |||||||| ||||||| |||||| |||| ||||||||| Sbjct 3 ATTGGTGGGTCGTGCTGGGTTCGAACCAGCGACCAATTGATTAAGAGTCAACTGCTCTAC 62 Query 416 CGACTGAGCTAACGACCCA 434 | ||||||||||||||||| Sbjct 63 CAACTGAGCTAACGACCCA 81 >seq646642 Length=16316 Score = 86.0 bits (94), Expect = 1e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 358 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 417 ||||||||| ||| | |||||| |||||| ||||||||| |||||||||||||||| Sbjct 1637 TGGTGGGTCCTGAGTGGCTCGAACACTCGACCTACGGATTAAGAGTCCGCTGCTCTACCA 1578 Query 418 ACTGAGCTAACGACCCA 434 |||||||||| ||||| Sbjct 1577 ACTGAGCTAAGAACCCA 1561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 98719438041780