Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq649786 244 1e-59 seq360635 89.7 7e-13 seq271499 87.8 2e-12 >seq649786 Length=1608 Score = 244 bits (270), Expect = 1e-59 Identities = 605/912 (66%), Gaps = 26/912 (3%) Strand=Plus/Plus Query 35867 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 35926 ||||| ||||| ||||| || || || || ||||||||||| || | || || || | Sbjct 41 TTTTGATATTCGCCCACCCGCTTCTCAAAGAAATTAGTTTTTCCCTGCAAGGAAATCATG 100 Query 35927 TCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCC---AATTCAGAA 35983 ||||| || ||||| ||||||| ||||||||| ||||| ||| || || Sbjct 101 TCCATAAAGTCGAAAGGATTGACGGCATTATAAACTTTTTG---TCCGGTTAACTCCACC 157 Query 35984 ATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATA 36043 | ||| | ||||| ||||| ||||||||| |||| | |||||| || || Sbjct 158 AGCAAACGGTCTGCCACAAACTCTATATATTGACACATCGAAGCGGCATTCATCCCGATT 217 Query 36044 AGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATA 36103 | | || ||||| | | || | ||| || | |||||| || |||||| | ||| Sbjct 218 AAACTCACGGGAAGCGAATCGGTCACAAACTCCTTTTCAATTACTACGGCGTCTTTGATA 277 Query 36104 ATAGATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAA-ACATCAA--ACAT 36160 || || || |||| | || | | | |||||| | || || ||| Sbjct 278 ATTTCAATCACCCGCTCTTTTGGCAACGGCTGAATCACGTGTTTAGTATATAAATGACAG 337 Query 36161 GCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCG 36220 || |||||||| || | || ||||| | || ||||| || ||||| | | || Sbjct 338 GCAAAATCGCAATGCAAGCCTTCGTCGCGCGAGATCAATTCATTCGAAAAGCTCAAGCCC 397 Query 36221 GGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATT 36280 ||||| ||||| || || || |||||||| ||||| ||| || || || |||||||| Sbjct 398 GGCATCAGGCCGCGTTTCTTCAGCCAAAAGATGGAGCAAAACGAACCCGAGAAGAAAATC 457 Query 36281 CCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCATGTATCCAC 36340 ||||| || || ||||| ||||| || | |||| | || Sbjct 458 CCTTCCACGGCGGCAAAAGCAATCAGACGCTCTTGANNNNNNNNNNNNNNNNA-----AC 512 Query 36341 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGA 36400 ||||||||||| |||||||| || || ||| || || || || | || ||| Sbjct 513 ------GCCCAATCGGCTTTCTTTTTCACGCATTCCATCGTTTCAATGGCGTGAAGCAGA 566 Query 36401 TAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAA 36460 || ||| || | ||||| || || |||||||| | || ||| |||| || Sbjct 567 CGGTCTTTCTCCTGCGCGTCTTTCACGTAGGTATCAATGAGCAGCGAATAGGTTTCGGAG 626 Query 36461 TGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACT 36520 || || ||||||| ||| ||||| || ||||||||| || |||| || ||| || ||| Sbjct 627 TGGATATTTTCAACGGCAATTTGGAAGCCGTAGAAAAATTTAGCTTCCGTATATTGCACT 686 Query 36521 TCTG-TACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 36579 || | ||||||| |||| || | |||||| || || |||||||| ||||| |||||||| Sbjct 687 TCCGACACAAAAT-GTTCCGCCAGATTTTCGTTTACAATTCCGTCGCTGGCGGCAAAAAA 745 Query 36580 CGCCAATACATGTTTTATAAAATATTTTTCGT-TTGGTGTTAGTTTATTCCAATCATTGA 36638 |||||| || || | ||||||| | || | |||| | || | | |||||| || | Sbjct 746 CGCCAAAACGTGCGTGATAAAATGTCGCTCATCGTGGTTTAAGCCT-TGCCAATCGTTCA 804 Query 36639 TATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACA 36698 ||||| | || ||| | |||||| | |||||||| || || || | || || | Sbjct 805 AATCTTGACTTAAATCAATTTCTTCAGCCGTCCAAAAGCTGGCTTCGGCTTGCTTGTAAA 864 Query 36699 TATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTAT-TTTGATTTTTTGCA 36757 ||||| ||||| || | ||| ||||| | ||||| | | |||| ||| ||||| Sbjct 865 ATTTCCAAATGTCGTGGTGGGCAATGGGAAAGAGGACAAAGCGGTCTTTGTTTTCTTGCA 924 Query 36758 AGGATTGGTTCC 36769 | || |||||| Sbjct 925 A-AATCGGTTCC 935 >seq360635 Length=7270 Score = 89.7 bits (98), Expect = 7e-13 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 65180 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 65239 ||| || ||||||| ||||| || | | ||| || || |||||||| || || || | Sbjct 620 TACCTGGTATTCTCCTGACAACACCCGTCTAGTATAGATGTTACTGGTGTAAGGCTCAAA 561 Query 65240 AGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 65299 | ||| ||||||||||| ||||||||||||||||| ||||| || | ||||| | Sbjct 560 ACTTTCACAGTTTCCCAAAATCTGAGCAGTTGATGCAGTTGGCATCGGAGACACCAGCAG 501 Query 65300 ACTATTTCTAAGACCGTAT 65318 |||||| | | |||||| Sbjct 500 ACTATTGCGCACTCCGTAT 482 >seq271499 Length=3361 Score = 87.8 bits (96), Expect = 2e-12 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 65781 TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTA 65840 |||| || |||||||||||| ||||| || || | ||||| || | || || ||||| Sbjct 2310 TATTCTACTATCTCAGTGCAGAGATTGCTGCAGGTAATGGTCCCCAGGTTCTGCTGATTG 2369 Query 65841 CTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAG 65898 |||||| ||||| ||||| || || || || |||| |||||||| ||| |||||| Sbjct 2370 CTCTTTCGATTACAGGCATCTTTGTAGAGCATATATGGTGTACCAGTCTCAGTCTGAG 2427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 644519605846680