Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq307809 107 2e-18 >seq307809 Length=2175 Score = 107 bits (118), Expect = 2e-18 Identities = 179/259 (69%), Gaps = 0/259 (0%) Strand=Plus/Plus Query 20928 GGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGG 20987 || |||| ||| || |||| ||| | ||||||| | |||| | || ||||| || Sbjct 660 GGTTCAATGTGATTCAGATAAATGTGAGTATCACCCATGTTGTGGATGAACTCTCCTGGT 719 Query 20988 GTCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAAC 21047 | || || || || ||||| |||| ||| |||| | ||||||||||| |||||||| Sbjct 720 CTTAGTCCAGTCACATGAGCAATCATATATGTCAACAAAGCGTAGCTGGCAATGTTAAAT 779 Query 21048 GGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGA 21107 || || ||||| || | || || || | |||||||| | |||| || || || || Sbjct 780 GGAACACCGAGACCAACATCTGCCGAGCGCTGGTACAACAGGCACGAGAGTTCTCCGTTG 839 Query 21108 GCCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCG 21167 || || || ||||| || | |||| || || || || ||||| | || || Sbjct 840 GCAACATAGAACTGCACCAGAGCGTGGCATGGTGGCAGCGCCATTTTGGGAAGATCTTTC 899 Query 21168 GGGTTCCACGCGCACATAA 21186 || |||||||| ||||||| Sbjct 900 GGATTCCACGCACACATAA 918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419124022794960