Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq47075 93.3 4e-14 seq1631541 87.8 2e-12 >seq47075 Length=4692 Score = 93.3 bits (102), Expect = 4e-14 Identities = 74/89 (83%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 139575 CTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGA 139634 |||| |||||||||||||| |||| || || ||||||||||| || || ||| ||| Sbjct 2978 CTTTCTGAATGTTATAATCACTCAAGGTTCTTCCATCTTCGAGCTGCTTTCCCGCAAAGA 2919 Query 139635 TCAGACGTTGCTGATCGGGAGGTATGCCT 139663 |||||||||||||||| ||||| |||||| Sbjct 2918 TCAGACGTTGCTGATCAGGAGGGATGCCT 2890 >seq1631541 Length=403 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 153632 GGCAATCGACGCCAAGTTGCAAACGGCAGTTTCGTCGGGGGCGCAATATTGTACTATTTC 153691 |||||| || |||||||||||||| || ||||||||| | ||||| || ||||| Sbjct 164 GGCAATGGAGGCCAAGTTGCAAACCGCCACTTCGTCGGGAGAAGTATATTCTATAATTTC 223 Query 153692 CGCACACAAATTGCTGCATTTTATCAGGCCGCAATTACTTTGATTGCTTTTGCGGTTACA 153751 || || | |||||| | |||||| ||| ||| |||||||| ||||| || Sbjct 224 CGTGCAAAGATTGCTTGACTTTATCGTGCCCAAATGTTGCTGATTGCTCTTGCGATTGGC 283 Query 153752 AGCGTCCTTGTATAGCATGTATGGTGTGCCGGTTTC 153787 ||||| ||||| ||||| || || || || ||||| Sbjct 284 GGCGTCTTTGTAAAGCATATACGGCGTTCCTGTTTC 319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 485773604978400