Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq649786 239 6e-58 seq533080 105 9e-18 seq656496 93.3 6e-14 seq360635 89.7 7e-13 >seq649786 Length=1608 Score = 239 bits (264), Expect = 6e-58 Identities = 606/913 (66%), Gaps = 28/913 (3%) Strand=Plus/Plus Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728 ||||| ||||| ||||| || || || || |||||||||||||| | ||| || || | Sbjct 41 TTTTGATATTCGCCCACCCGCTTCTCAAAGAAATTAGTTTTTCCCTGCAAGGAAATCATG 100 Query 49729 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCC---AATTCAGAA 49785 ||||| || || || |||||| ||||||||| ||||| ||| || || Sbjct 101 TCCATAAAGTCGAAAGGATTGACGGCATTATAAACTTTTTG---TCCGGTTAACTCCACC 157 Query 49786 ATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATA 49845 | ||| | || || ||||| ||||||||| |||| | |||||| || || Sbjct 158 AGCAAACGGTCTGCCACAAACTCTATATATTGACACATCGAAGCGGCATTCATCCCGATT 217 Query 49846 AGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATA 49905 | | || ||||| | | || | ||| || | |||||| ||| || ||| | ||| Sbjct 218 AAACTCACGGGAAGCGAATCGGTCACAAACTCCTTTTCAATTACTACGGCGTCTTTGATA 277 Query 49906 ATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAA-ACATCAA--ACAT 49962 || | || |||| | || || | | |||||| | || || ||| Sbjct 278 ATTTCAATCACCCGCTCTTTTGGCAACGGCTGAATCACGTGTTTAGTATATAAATGACAG 337 Query 49963 GCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCG 50022 || |||||||| |||| || ||||| | || | ||| || ||||| | | || Sbjct 338 GCAAAATCGCAATGCAAGCCTTCGTCGCGCGAGATCAATTCATTCGAAAAGCTCAAGCCC 397 Query 50023 GGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATT 50082 ||||| ||||| || || || |||||||| ||||| ||| || || || ||||| || Sbjct 398 GGCATCAGGCCGCGTTTCTTCAGCCAAAAGATGGAGCAAAACGAACCCGAGAAGAAAATC 457 Query 50083 CCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCATGTATCCAC 50142 ||||| || |||||||| |||| || | |||| | || Sbjct 458 CCTTCCACGGCGGCAAAAGCAATCAGACGCTCTTGANNNNNNNNNNNNNNNNA-----AC 512 Query 50143 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 50202 ||||||||||| |||||||| || || ||||||||| ||||| | || ||| Sbjct 513 ------GCCCAATCGGCTTTCTTTTTCACGCATTCCATCGTTTCAATGGCGTGAAGCAGA 566 Query 50203 TAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAA 50262 || ||| || | ||||| || || ||||| || | || ||| |||| || Sbjct 567 CGGTCTTTCTCCTGCGCGTCTTTCACGTAGGTATCAATGAGCAGCGAATAGGTTTCGGAG 626 Query 50263 TGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACT 50322 || || ||||||| ||| || || || ||||||||| || |||| || ||| |||||| Sbjct 627 TGGATATTTTCAACGGCAATTTGGAAGCCGTAGAAAAATTTAGCTTCCGTATATTGCACT 686 Query 50323 TCTG-TACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 50381 || | ||||||| |||| || | |||||| || || |||||||| ||||| |||||||| Sbjct 687 TCCGACACAAAAT-GTTCCGCCAGATTTTCGTTTACAATTCCGTCGCTGGCGGCAAAAAA 745 Query 50382 CGCCAATACATGTTTTATAAAATGTTTTTCGTTG-GGTGTTAGTTTATTCCAATCATTGA 50440 |||||| || || | ||||||||| || | | ||| | || | | |||||| || | Sbjct 746 CGCCAAAACGTGCGTGATAAAATGTCGCTCATCGTGGTTTAAGCCT-TGCCAATCGTTCA 804 Query 50441 TATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACA 50500 ||||| | || ||| | |||||| | |||||||| || || || | || || | Sbjct 805 AATCTTGACTTAAATCAATTTCTTCAGCCGTCCAAAAGCTGGCTTCGGCTTGCTTGTAAA 864 Query 50501 TATTCCAGATGTCATGATATTGGATTGGGAAA-ATAACAAATCTAT-TTGGATTTGGTGC 50558 ||||| ||||| || | | | ||||||| | ||||| | | || | ||| ||| Sbjct 865 ATTTCCAAATGTCGTGGT-GGGCAATGGGAAAGAGGACAAAGCGGTCTTTGTTTTCTTGC 923 Query 50559 AAGGATCGGTTCC 50571 || ||||||||| Sbjct 924 AA-AATCGGTTCC 935 >seq533080 Length=1015 Score = 105 bits (116), Expect = 9e-18 Identities = 167/237 (70%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 79851 ATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACA 79910 ||| | | |||| || || || |||||||| | || | || ||||| || | |||||| Sbjct 550 ATAAAGTTGTTCAAATTCATCACCCCAAACTTTGTGAAGGCCTGGACACTCATGAGGACA 609 Query 79911 CATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAG 79970 ||||| | ||| || |||| || ||||| ||||| || | ||| |||||||| || Sbjct 610 CATCAGTGTCCAGTCACCATTGCTCTCGACTCGCTTCATGAATAAATCTGGAATCCATAG 669 Query 79971 AGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGA 80029 || ||| ||||| |||| | || ||||| || || |||||||| || | ||| | Sbjct 670 TGC-ATAGAATAGGTCTCGTGCTCGCTGCTCTTCCTTGCCTGTATTTTTCCGACAATCCA 728 Query 80030 GGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTC 80086 | || | | || || | |||||| ||||||| ||| ||||| | | | || |||| Sbjct 729 GAAAGTCAAAGATGTCGGCATGCCATGGTTCCAGGTAAATGGCAAAAGCACCAGGTC 785 >seq656496 Length=912 Score = 93.3 bits (102), Expect = 6e-14 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 80172 CCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGC 80231 ||||||||| ||||| ||| ||||||||| | ||| ||||| | ||| ||||| Sbjct 420 CCCGGAGATGTAGCTGCCAGAGGCACGAATGCAATGAATATTCAGACCAACTCCACCTGC 479 Query 80232 CATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATC 80291 | || || || | ||| ||| |||| || || |||||||| || || ||||| ||||| Sbjct 480 ACTCTTTGAAATAAGTGCACATTGTTTCAAAGTGTCATAGATTCCTTCAATGCTGTCATC 539 Query 80292 AATCATGTTAAGTAGAAAACAGCT 80315 ||||||| | ||||||||||| Sbjct 540 AATCATGGACAACAGAAAACAGCT 563 >seq360635 Length=7270 Score = 89.7 bits (98), Expect = 7e-13 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 79059 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCAC 79118 ||| || ||||||| ||||| || | | ||| || || |||||||| || || || | Sbjct 620 TACCTGGTATTCTCCTGACAACACCCGTCTAGTATAGATGTTACTGGTGTAAGGCTCAAA 561 Query 79119 CGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAA 79178 |||| ||||||||||| |||||||||||||| |||||||| || | ||||| | Sbjct 560 ACTTTCACAGTTTCCCAAAATCTGAGCAGTTGATGCAGTTGGCATCGGAGACACCAGCAG 501 Query 79179 ACTATTTCTAAGACCGTAT 79197 |||||| | | |||||| Sbjct 500 ACTATTGCGCACTCCGTAT 482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 703368969164280