Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq649786 219 6e-52 seq1631541 91.5 2e-13 seq360635 87.8 2e-12 >seq649786 Length=1608 Score = 219 bits (242), Expect = 6e-52 Identities = 597/911 (66%), Gaps = 24/911 (3%) Strand=Plus/Plus Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833 ||||| ||||| ||||| || || || || |||||||| ||||| | ||| || || | Sbjct 41 TTTTGATATTCGCCCACCCGCTTCTCAAAGAAATTAGTTTTTCCCTGCAAGGAAATCATG 100 Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCC---AATTCAGAA 41890 ||||| || || || |||||| ||||||||| ||||| ||| || || Sbjct 101 TCCATAAAGTCGAAAGGATTGACGGCATTATAAACTTTTTG---TCCGGTTAACTCCACC 157 Query 41891 ATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATA 41950 | ||| | ||||| | || ||||||||| |||| | |||||| || || Sbjct 158 AGCAAACGGTCTGCCACAAACTCTATATATTGACACATCGAAGCGGCATTCATCCCGATT 217 Query 41951 AGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATA 42010 | | || ||||| | | || | ||| || | |||||| || |||||| | ||| Sbjct 218 AAACTCACGGGAAGCGAATCGGTCACAAACTCCTTTTCAATTACTACGGCGTCTTTGATA 277 Query 42011 ATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAA-ACATCAA--ACAT 42067 || | || |||| | || | | | |||||| | || || ||| Sbjct 278 ATTTCAATCACCCGCTCTTTTGGCAACGGCTGAATCACGTGTTTAGTATATAAATGACAG 337 Query 42068 GCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCG 42127 || |||||||| |||| || || || | || ||||| || ||||| | | || Sbjct 338 GCAAAATCGCAATGCAAGCCTTCGTCGCGCGAGATCAATTCATTCGAAAAGCTCAAGCCC 397 Query 42128 GGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATT 42187 ||||| ||||| || || || |||||||| || || ||| || || || ||||| || Sbjct 398 GGCATCAGGCCGCGTTTCTTCAGCCAAAAGATGGAGCAAAACGAACCCGAGAAGAAAATC 457 Query 42188 CCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCATGTATCCAC 42247 ||||| || || ||||| ||||| || | |||| | || Sbjct 458 CCTTCCACGGCGGCAAAAGCAATCAGACGCTCTTGANNNNNNNNNNNNNNNNA-----AC 512 Query 42248 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 42307 ||||||||||| |||||||| || || ||||||||| ||||| | || ||| Sbjct 513 ------GCCCAATCGGCTTTCTTTTTCACGCATTCCATCGTTTCAATGGCGTGAAGCAGA 566 Query 42308 TAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAA 42367 || ||| || | ||||| || || ||||| || | || ||| |||| || Sbjct 567 CGGTCTTTCTCCTGCGCGTCTTTCACGTAGGTATCAATGAGCAGCGAATAGGTTTCGGAG 626 Query 42368 TGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACT 42427 || || ||||||| ||| || || || ||||||||| || | || || ||| || ||| Sbjct 627 TGGATATTTTCAACGGCAATTTGGAAGCCGTAGAAAAATTTAGCTTCCGTATATTGCACT 686 Query 42428 TCTG-TACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAA 42486 || | ||||||| |||| || | ||||||||| || |||||||| ||||| |||||||| Sbjct 687 TCCGACACAAAAT-GTTCCGCCAGATTTTCGTTTACAATTCCGTCGCTGGCGGCAAAAAA 745 Query 42487 CGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATTTATTCCAATCATTGAT 42546 |||||| || || | ||||||| | || || | |||| | |||||| || | Sbjct 746 CGCCAAAACGTGCGTGATAAAATGTCGCTCATCGTGGTTTAAGCCTTGCCAATCGTTCAA 805 Query 42547 ATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACAT 42606 ||||| | || ||| | |||||| |||||||||| ||||| || | || || | Sbjct 806 ATCTTGACTTAAATCAATTTCTTCAGCCGTCCAAAAGCTGGCTTCGGCTTGCTTGTAAAA 865 Query 42607 ATTCCAGATATCATGATATTGAATTGGGAAAATAACAAATCTAT-TTGGATTTGGTGCAA 42665 ||||| || || || | ||| || || | ||||| | | || | ||| ||||| Sbjct 866 TTTCCAAATGTCGTGGTGGGCAATGGGAAAGAGGACAAAGCGGTCTTTGTTTTCTTGCAA 925 Query 42666 GGATCGGTTCC 42676 ||||||||| Sbjct 926 -AATCGGTTCC 935 >seq1631541 Length=403 Score = 91.5 bits (100), Expect = 2e-13 Identities = 164/239 (69%), Gaps = 3/239 (1%) Strand=Plus/Plus Query 71663 AATCAAATCTCCCATCTA---TTACAAACACGTTCAAGGCAACAGATGCCAGATTACAAA 71719 ||||||| || || ||| ||| |||| |||||||| || |||| || |||| Sbjct 127 AATCAAACCTTCCTTCTGCGTTTATAAACTTAGGCAAGGCAATGGAGGCCAAGTTGCAAA 186 Query 71720 CGGCTACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGA 71779 | || || || | | | | ||||| ||||||||| ||||||||||| || |||| | Sbjct 187 CCGCCACTTCGTCGGGAGAAGTATATTCTATAATTTCCGTGCAAAGATTGCTTGACTTTA 246 Query 71780 TGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACG 71839 | || || |||| ||| ||||| ||||| || || || || ||||| ||| ||| Sbjct 247 TCGTGCCCAAATGTTGCTGATTGCTCTTGCGATTGGCGGCGTCTTTGTAAAGCATATACG 306 Query 71840 GAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATT 71898 | || || ||||| || || | ||| | ||| | ||| | || | ||||||||| Sbjct 307 GCGTTCCTGTTTCTATTTGCGCTTCCAAAATTTCGAACCACAAATCTTGCGCCTTTATT 365 >seq360635 Length=7270 Score = 87.8 bits (96), Expect = 2e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 71142 TACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCAC 71201 ||| || ||||||| ||||| || | | ||| || || |||||||| || || || | Sbjct 620 TACCTGGTATTCTCCTGACAACACCCGTCTAGTATAGATGTTACTGGTGTAAGGCTCAAA 561 Query 71202 TGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAG 71261 ||| ||||||||||| ||||||||||||||||| ||||| || | ||||| || Sbjct 560 ACTTTCACAGTTTCCCAAAATCTGAGCAGTTGATGCAGTTGGCATCGGAGACACCAGCAG 501 Query 71262 ACTATT 71267 |||||| Sbjct 500 ACTATT 495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657217029710520