Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_004681.1 Length=75931 Score E Sequences producing significant alignments: (Bits) Value seq652898 282 2e-71 seq636339 100 1e-16 >seq652898 Length=17576 Score = 282 bits (312), Expect = 2e-71 Identities = 522/759 (69%), Gaps = 15/759 (2%) Strand=Plus/Plus Query 66690 CCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGG 66749 |||||||||| | | |||||| ||| |||||| | ||||| || | ||||||| Sbjct 16678 CCACCGGCTCGCTGGGCCTGGACATCGCGCTGGGCGTGGGGGGCCTGCCCCGTGGCCGGG 16737 Query 66750 TGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGG 66809 |||| |||||||| ||||| ||||| || || ||| | || ||| || || | | | | Sbjct 16738 TGGTTGAAATCTATGGCCCGGAATCCTCGGGCAAGACCACGCTGGCGCTGCAGGTGATCG 16797 Query 66810 CCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACC 66869 || | ||| ||| || |||| | ||||| | |||| || ||||| | |||||| Sbjct 16798 CCGAGATGCAAAAGCAGGGCGGCACCTGCGCCTTCGTCGATGCGGAGCATGCGCTGGACG 16857 Query 66870 CCGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACA 66929 | ||||| | ||||| ||| | || | |||| || | ||||| |||| Sbjct 16858 TGCAATACGCGCAAAAACTCGGCGTGCAACTGTCCGACCTGCTGATCAGCCAGCCCGACA 16917 Query 66930 CTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCG 66989 | ||||| || || ||||||||||| ||| ||| || || |||| | | | | Sbjct 16918 CCGGCGAACAAGCGCTGGAGATCGTCGACAGCCTGGTGCGCTCCGGCGCGGTCGACCTGA 16977 Query 66990 TCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGG 67049 |||| || ||||| ||||| |||||| ||| ||||| ||||||||||||| || | Sbjct 16978 TCGTGGTGGACTCGGTGGCCGCCCTGACGCCCAAGGCCGAAATCGAAGGCGACATGGGCG 17037 Query 67050 ACAGTCACGTCGG-CCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACTGGC 67108 || | | | ||| |||||| ||||| || ||| ||||| ||||||||||||| | Sbjct 17038 AC-GCCCTGCCGGGCCTGCAAGCGCGGCTGATGAGCCAGGCATTGCGCAAGCTCACCGCG 17096 Query 67109 ACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGC 67168 || ||| | |||||| || ||| |||||||| | ||| |||||||||| Sbjct 17097 ACGATCAAGAAGACCAACTGCATGGTCGTCTTCATCAACCAGATCCGCATGAAGATCGGC 17156 Query 67169 AACGTGGGCTACGGC----CCGAATGAGACCACCACGGGCGGAAAGGCTTTGAGGTTCTA 67224 ||| | |||| ||||| |||||||| ||||| || || | | |||||| Sbjct 17157 ---GTGATGTTCGGCAGCCCCGAA----ACCACCACCGGCGGCAATGCGCTCAAGTTCTA 17209 Query 67225 CGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGT 67284 |||||| || ||| |||| |||| |||| || |||| ||| | |||||||| || | Sbjct 17210 CGCCTCGGTGCGCCTGGACATCCGCCGCACCGGCACCATCAAGAAGGGCGATGAAGCCAT 17269 Query 67285 CGGCAACCGCACCCGGGTGAAAGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGC 67344 |||||| ||| ||| || || ||||||||||| | ||||||| | | ||| Sbjct 17270 TGGCAACGAAACCAAGGTCAAGGTGGTCAAGAACAAAGTCAGCCCGCCGTTCAAGACCGC 17329 Query 67345 CGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGC 67404 ||||||| | || ||| || || |||||| || |||| |||| || ||||| ||| Sbjct 17330 CGAGTTCGACATCCTGTTTGGCGAAGGCATCAGCCGCGAGGGCGAAATCATCGACATGGG 17389 Query 67405 CGTG-TCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGT 67442 |||| ||| | | ||| | |||||||||||||||| Sbjct 17390 CGTGAACGCCAAG-ATCGTGGAAAAGTCGGGCGCCTGGT 17427 >seq636339 Length=1141 Score = 100 bits (110), Expect = 1e-16 Identities = 90/113 (80%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 66996 TTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTC 67055 ||||||| ||||| ||||||||||| || ||| | |||||||| || ||||| || Sbjct 515 TTGACTCGGTGGCCGCCCTGGTGCCCAAGGCGGAGTTGGAAGGCGAGATGGGGGAAAGCA 456 Query 67056 ACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACTGGC 67108 | | || |||| |||||||||||||||||||| ||||||||||||| ||| Sbjct 455 AAATGGGGTTGCAGGCGCGCCTCATGTCGCAGGCGTTGCGCAAGCTCACCGGC 403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 237942551899724