Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_005284.1 Length=54865 Score E Sequences producing significant alignments: (Bits) Value seq532148 248 3e-61 seq643591 140 1e-28 >seq532148 Length=3883 Score = 248 bits (274), Expect = 3e-61 Identities = 281/375 (75%), Gaps = 5/375 (1%) Strand=Plus/Plus Query 31248 AGCATCGCCGCGACGTTGCCGATGCGCTTCGTCAGCAACAACCAGTCGAGGTTTGGCGTG 31307 ||||| || || | ||||| |||||||| ||||||| ||||||||| ||||||||||| Sbjct 6 AGCATTGCGCCGGCATTGCCAATGCGCTTGGTCAGCAGCAACCAGTCAAGGTTTGGCGTT 65 Query 31308 TCGGCGATCAGGCGGAACAGGTCCGCGCGCCACGCCGGATCGACAGTGTTGTCGAAAACG 31367 | |||| ||| |||||||| |||||||| || || || | ||||||||| || Sbjct 66 GCCATGATCGAGCGCAACAGGTCGGCGCGCCATGCGCTGTCCACCGCGTTGTCGAACACA 125 Query 31368 TCGGCGAGCGACGCGCAGAACACGCGCTGTCGGTGGCCGTGGATTGCATAGAACGCGCCG 31427 ||||| || ||||| ||||| ||||| ||| ||| || ||| |||| || | Sbjct 126 TCGGCCAGGCTGGCGCAAAACACCCGCTGGCGGCAGCCATGCGCGGCAAAGAAGGCTTCA 185 Query 31428 T----CGCGGTTCCACTTCATGGGCTTGCGCCAGTTCGCGGGCGACGTGCGCCGCTGCGG 31483 | ||| ||||| || |||||||||||||| || | |||||||| |||| Sbjct 186 TGCTTCGCA-TTCCAGGCCAGCGGCTTGCGCCAGTTGGCAGCGCTGGTGCGCCGGCGCGG 244 Query 31484 CGCGCCGGGCCCCCAATTGACCGCCGTGCCGCCGGAAAAGCGCGCATTGCGCGCCTCGGC 31543 ||||| || ||||||||||||||| ||| || ||||||||||||||| |||||||| Sbjct 245 GGCGCCAGGGCCCCAATTGACCGCCCGGCCTGCGCCAAAGCGCGCATTGCGTGCCTCGGC 304 Query 31544 ATAACAGTGGTCGCATCCCGGACCGACCTTCTGGCAACCTTCCCACGGGTTGAACGTGTG 31603 ||| ||||| ||||| || || || ||| |||||||||||||| |||||||| || || Sbjct 305 ATAGCAGTGCTCGCAGCCGGGGCCTGTCTTTTGGCAACCTTCCCAGGGGTTGAAGGTATG 364 Query 31604 GTCGCACCATTCGAT 31618 || ||||||||| Sbjct 365 GTGTGTCCATTCGAT 379 >seq643591 Length=1265 Score = 140 bits (154), Expect = 1e-28 Identities = 248/350 (71%), Gaps = 30/350 (9%) Strand=Plus/Minus Query 30876 CCCCATTGCTTGAACAGGAACGGCACATCTGCGGCAGCGCACTGGTCGCGCAGCGACCGA 30935 |||||||||||||| | ||||||||| | ||| | ||| ||||||||||| || Sbjct 334 CCCCATTGCTTGAAAAAGAACGGCACCCCGGCGCCCTGGCATTGGTCGCGCAGGCTGCGT 275 Query 30936 GCCCAGTCGGGATGCATCGGGCGGGCGCCGTGGCCGCTTTCGCCGCCGGCGATCACCCAA 30995 |||||||| || ||||||||||| |||||| ||||||||||||||||| |||||||||| Sbjct 274 GCCCAGTCCGGGTGCATCGGGCGCGCGCCGGGGCCGCTTTCGCCGCCGACGATCACCCA- 216 Query 30996 TGTAGGCCGCCGTCG-GCTGGTCGGCGTA-GTTCGAACTGGCGCTTGCCGCCGTGCGTGC 31053 || || | |||| || ||| ||| || ||| |||| ||| || || | Sbjct 215 -GTCGGGC-ATGTCGCGCAGGT-GGCCTATGTT-------GCGC-CGCCCCCATG---GG 170 Query 31054 GGAAGTTGCCGGTTGGCTCGCTGTAGATGTGGAAGCGCAGG------TCAACCGACCCAA 31107 | | || || |||| | ||||| || | | || || |||| || | Sbjct 169 GCACCTTCTTCGT--ACTCGAT---GATGTCGAGCCACGGGCTCCAATCGACCGCGCCGA 115 Query 31108 GCAGCGGCTCCATCGACAGGAAGCG-TACGCGCGCGGGTACTGCGAGCAGCTTCGGGATG 31166 ||| ||||||| |||||| || | || ||| |||| ||||||||||||||| Sbjct 114 GCAAGGGCTCCAGGCTCAGGAACCGCTTTGC-CGCTGGTAGCCGTAGCAGCTTCGGGATG 56 Query 31167 TCGCGGTCGGCCTCTTCCTGGTTGACGATCGTCGCGCCGATCCAGACGTT 31216 || || ||||| ||||||||| || ||||| ||||||||||||| ||| Sbjct 55 TCTCGATCGGCTTCTTCCTGGGTGCATATCGTTGCGCCGATCCAGATGTT 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 171988898300498