Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq307809 161 7e-35 >seq307809 Length=2175 Score = 161 bits (178), Expect = 7e-35 Identities = 384/576 (67%), Gaps = 7/576 (1%) Strand=Plus/Plus Query 25389 GGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCTACGTGATCCAGGTAG 25448 ||||| || || |||| | | ||||| ||||| |||||| | ||||| ||| || Sbjct 621 GGAAATGGCCTTGGCTTGCGTTTTAGCTGCTCCTTCAACGGTTCAATGTGATTCAGATAA 680 Query 25449 ACGTGAGCGTCTCCCAGAGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTAACGTAAGCC 25508 | ||||| || |||| |||||| |||||||| ||| ||| || || || | ||| Sbjct 681 ATGTGAGTATCACCCATGTTGTGGATGAACTCTCCTGGTCTTAGTCCAGTCACATGAGCA 740 Query 25509 ATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATGTCC 25568 ||||| || || | | | ||||||||| |||||||| || || |||| || | || Sbjct 741 ATCATATATGTCAACAAAGCGTAGCTGGCAATGTTAAATGGAACACCGAGACCAACATCT 800 Query 25569 CCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACACAT 25628 || || | |||||| | | | |||||||| ||| ||| | || || ||||| || Sbjct 801 GCC-GAGCGCTGGTACAACAGGCACGAGAGTTCTCCGTTGGCAACATAGAACTGCACCAG 859 Query 25629 GGTGTAGCACGGAGGAAGAGCTATAAGGCCCAAGTCTTTAGGGTTCCAGGCGCACACGAT 25688 | || ||| || || || || || | | ||||| || ||||| || |||| || Sbjct 860 AGCGTGGCATGGTGGCAGCGCCATTTTGGGAAGATCTTTCGGATTCCACGCACACATAAT 919 Query 25689 GATGCACCTGTCTTCTGGGTTGTCCCTGATAAGATCCGCGGTG---TTTTGCAGCTGATC 25745 || | ||||| | ||| || | | ||| | | | | | || |||||||| Sbjct 920 CATTCGTCTGTCATTTGG--TGAACTTT-TAATCTTCTCAATCACATCTTTTAGCTGATC 976 Query 25746 CACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATACCTCCA 25805 ||| ||| ||| | || || |||||| |||| || || || ||| | ||| Sbjct 977 CACACCCTGCCCAGTATAATCATGATGCATGTCTTTGTAATCAGCGCCTGAATGACGCCA 1036 Query 25806 CTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGCCCCTCTTATC 25865 ||| || || ||||||||||| ||||| || || || | | | || || | || || Sbjct 1037 CTGAAAACCATACACCGGTCCAAGGTCGCCTTCCTCACGATCGTTTAAACCAATTTTGTC 1096 Query 25866 CAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTT 25925 | || ||| || ||||||||||||||||| | || ||||| | | ||| || Sbjct 1097 GAGGAATGCTCGTGAGCCATTGGCGTCCCAGATGTGGACATTTTTCTCAGCCAACTCCTT 1156 Query 25926 GGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTC 25961 || ||||| || |||| | |||||||| |||||| Sbjct 1157 GGCATTTGTTGATCCTCGAATGAACCACAACAGCTC 1192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 333258151966971