Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_005856.1 Length=94800 Score E Sequences producing significant alignments: (Bits) Value seq1658887 1743 0.0 seq514247 129 3e-25 >seq1658887 Length=1336 Score = 1743 bits (1932), Expect = 0.0 Identities = 1111/1204 (92%), Gaps = 4/1204 (0%) Strand=Plus/Minus Query 7649 TAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCG-GCTGACTCAGTCATTTCATTTCT 7707 |||||||||||||||||||| || | |||||| | |||||||| | ||| | || Sbjct 1202 TAGGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAAGCTGACTCGCTGATTAAAATTTC 1143 Query 7708 TCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTT 7767 | | || |||||||||||| ||| ||| | | |||||||||||||| | | ||| Sbjct 1142 GCGGATCTGGGCCGATTTTTTC--CCGCAAACACATCGAATCAGCCTATTTGGGCTATTT 1085 Query 7768 CTTC-GCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCA 7826 ||| ||||||| |||||||| || ||||||| ||||||||||||||||||||||||| Sbjct 1084 TTTCCGCCATTTCTGGCGTTATTTCCGGTTTTTACTGAGATCTCTCCCACTGACGTATCA 1025 Query 7827 TTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTT 7886 |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1024 TTTGGTCCACCCGAAACAGGTTGGCCAGGGTGAATAACATCGCCAGTTGGTTATCGTTTT 965 Query 7887 TCAGCAACCCCTTGTATCTGGCTTTCACGAAGCCGAACTGTCGCTTGATGATGCGAAATG 7946 |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct 964 TCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACG 905 Query 7947 GGTGCTCCACCCTGGCCCGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGT 8006 ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 904 GGTGCTCCACCTTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGT 845 Query 8007 TCTTGCGTGGATGCTGTTTCAAGGTTCTTACCTTGCCGGGGCGCTCGGCGATCAGCCAGT 8066 ||||||| |||||||| ||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 844 TCTTGCGCGGATGCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGCCAGT 785 Query 8067 CCACATCCACCTCGGCCAGCTCCTCGCGCTGTGGCGCCCCTTGGTAGCCGGCATCGGCTG 8126 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 784 CCACATCCACCTCGGCCAGCTCCTCGCGCTGTGGCGCTCCTTGGTAGCCGGCATCGGCTG 725 Query 8127 AGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGG 8186 |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| Sbjct 724 AGACAAATTGCTCCTCTCCATGAAGCAGATTACTCAGCTGATTGAGGTCATGCTCGTTGG 665 Query 8187 CCGCGGTGGTGACCAGGCTGTGGGTCAGGCCACTCTTGGCATCGACACCAATGTGGGCCT 8246 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 664 CCGCGGTGGTGACTAGGCTGTGGGTCAGGCCACTCTTGGCATCGACACCAATGTGGGCCT 605 Query 8247 TCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCT 8306 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 604 TCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCT 545 Query 8307 GCTCTTTGTTCTTGGTCGAGCTGGGTGCCTCAATGATGGTGGCATCGACCAAGGTGCCTT 8366 |||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||| Sbjct 544 GCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTT 485 Query 8367 GAGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGGCGGG 8426 | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 484 GGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGG 425 Query 8427 CCAGTTGATGCTGCTCCAGCAGGTGGCGGAAATTCATGATGGTGGTGCGGTCCGGCAAGG 8486 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct 424 CCAGTTGATGCTGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGG 365 Query 8487 CGCTATCCAGGGATAACCGGGCAAACAGACGCATGGAGGCGATTTCGTACAGAGCATCTT 8546 |||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||| Sbjct 364 CGCTATCCAGGGATAATCGGGCAAACAGGCGCATGGAGGCGATTTCGTACAGGGCATCTT 305 Query 8547 CCATCGCGCCATCGCTCAGGTTGTACCAATGCTGCATGCAGTGAATGCGTAGCATGGTTT 8606 |||| || || ||||||||||||||||||||||||||||||||||| || |||||||| | Sbjct 304 CCATGGCACCGTCGCTCAGGTTGTACCAATGCTGCATGCAGTGAATACGCAGCATGGTCT 245 Query 8607 CCAGCGGATAAGGTCGCCGGCCATTACCAGCCTTGGGGTAAAACGGCTCGATGACTTCCA 8666 ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 244 CCAGCGGATAAGGCCGCCGGCCATTACCAGCCTTGGGATAAAACGGCTCGATGACTTCCA 185 Query 8667 CCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCT 8726 ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct 184 CCATGTTTTGCCATGGCAGAATCTGATCCATGCGGGACAAGAAAATCTCTTTTCGGGTCT 125 Query 8727 GACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACC 8786 ||||||||||||||||||||||||||||||||||||| |||||||| |||||||| || Sbjct 124 GACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTGAGTTGATGGCTCATGATCCCCC 65 Query 8787 CTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC 8846 ||| | | ||| ||||| | ||||||||||||||||| ||||||||||||||||| Sbjct 64 CTGGAGTGCAGTTCCGGATGAACATCATGATCTCATATCAGGAACTTGTTCGCACCTTCC 5 Query 8847 TTAG 8850 |||| Sbjct 4 TTAG 1 >seq514247 Length=12388 Score = 129 bits (142), Expect = 3e-25 Identities = 328/496 (66%), Gaps = 11/496 (2%) Strand=Plus/Minus Query 8173 GTCATGCTCGTTGGCCGCGGTGGTGACCAGGCTGTGGGTCAGGCCACTCTTGGCATCGAC 8232 ||||||| ||| ||| ||||| || |||||| | || || ||||| || || Sbjct 4451 GTCATGCACGTGGGCTGCGGTCACCACGGCGCTGTGCGCAAGCCCGGTCTTGCTGTCTAC 4392 Query 8233 ACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTC 8292 || ||||| ||||||||| |||| |||||| | || || |||||| |||||||| Sbjct 4391 GCCGATGTGCAGCTTCATGCCGAAGTACCACTGCTGACCCTTGCAGGTCTGGTGCATCTC 4332 Query 8293 CGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAGCTGGGTGCCTCAATGATGGTGGCATC 8352 ||||||||| | ||| ||||||||||| | | || ||| ||||||||| Sbjct 4331 CGGATCGCGCTCGCCCTCGGCATTCTTGGTCGACGAGAGCGCGGAGATGGCGGTGGCATC 4272 Query 8353 GACCAAGGTGCCTTGAGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTT 8412 || | |||||| || | | | ||| ||| | | |||| ||| | | Sbjct 4271 CACGATGGTGCCGGTGCCCAGCTTCATGCC--CTT--GTCTTGCAGCACTTGCCCAACCT 4216 Query 8413 GAACAATTGGCG----GGCCAGTTGATGCTGCTCCAGCAGGTGGCGGAAATTCATGATGG 8468 | | | ||| | |||| | |||||||||||||| | | ||||| |||| | || Sbjct 4215 GGGCGAAAAGCGCAGCGCCCAGGTCATGCTGCTCCAGCAAGCGCCGGAACTTCAGCAGGG 4156 Query 8469 TGGTGCGGTCCGGCAAG---GCGCTATCCAGGGATAACCGGGCAAACAGACGCATGGAGG 8525 |||||| ||| |||| | |||| |||| | | | | || | |||| || Sbjct 4155 TGGTGCCGTCGGGCACGCGCGCGCAGCCCAGATAGATGCCCACGAAGCGGCGCAGGGCCA 4096 Query 8526 CGATTTCGTACAGAGCATCTTCCATCGCGCCATCGCTCAGGTTGTACCAATGCTGCATGC 8585 || | || ||| || ||||| || | ||| ||||||| |||| ||| ||| | Sbjct 4095 CGCTGTCCAGCAGTGCCTCTTCGCAGGCTTCGTCGGCCAGGTTGAACCAGTGCCGCACGA 4036 Query 8586 AGTGAATGCGTAGCATGGTTTCCAGCGGATAAGGTCGCCGGCCATTACCAGCCTTGGGGT 8645 ||| ||||| |||||| ||||| | ||| ||||||| || || |||||||||| Sbjct 4035 AGTACATGCGCAGCATGCGCGCCAGCCGCACCGGTGGCCGGCCGTTGCCCGCCTTGGGGT 3976 Query 8646 AAAACGGCTCGATGAC 8661 | || ||||||||||| Sbjct 3975 AGAAGGGCTCGATGAC 3960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 297102120916167