Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_006552.1 Length=65195 Score E Sequences producing significant alignments: (Bits) Value seq654591 127 8e-25 seq503541 107 8e-19 >seq654591 Length=8035 Score = 127 bits (140), Expect = 8e-25 Identities = 153/204 (75%), Gaps = 8/204 (4%) Strand=Plus/Plus Query 11204 ACCTCGGTGCTGTAGTGGTCCTGGCCGTCCTGGCCCTGCCACTTGCGGGTGCGTAGGCTG 11263 || ||||||||| | | ||| |||| |||| | ||| ||||||||||| | ||| Sbjct 5976 ACTTCGGTGCTGAACTTTTCCACGCCGCTCTGGTCGGTCCATTTGCGGGTGCGCAAACTG 6035 Query 11264 CCTTCGATGTAGACCTGGGAGCCCTTTCGCAGGTATTGCGCT-GCGATTTCGGCCAGCCG 11322 ||||| | || ||||| ||||| || |||||||| || ||| |||||||| ||||| || Sbjct 6036 CCTTCCACATACACCTGCGAGCCTTTGCGCAGGTACTG-GCTGGCGATTTCCGCCAGACG 6094 Query 11323 ---GCCAAAGAGCACGACCCGGTGCCACTCGGTGCGCTCCTGCTGCTGGCCGGTCTGCTT 11379 || ||||| |||| ||||||||||||||| |||| | | ||||||||||| Sbjct 6095 GTCGCGAAAGACCACG---CGGTGCCACTCGGTGGCTTCCTTCATTTCACCGGTCTGCTT 6151 Query 11380 GTCTTTCCAGCTTTCGCTAGTGGC 11403 ||||||||| | ||| | ||||| Sbjct 6152 GTCTTTCCACTTGTCGGTGGTGGC 6175 >seq503541 Length=9498 Score = 107 bits (118), Expect = 8e-19 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 64932 ATGAGCGAGAACACCATCAACCAGGCGATCAAGCGCCTTGGGTTCGATGGGCTGCTGACT 64991 || |||||||||||| | || || | |||||| | || | |||||| |||||||| Sbjct 4315 ATCAGCGAGAACACCCTGAATGCTGCCCTGAAGCGCATGGGCTACGATGGCCTGCTGACG 4374 Query 64992 GGTCATGGGTTGCGAGGGACTTTCTCCACTGCGCTGCATGAAATGGGCTACGACACGACG 65051 || || || | || | ||| |||| || ||||| | || ||||||||| || | Sbjct 4375 GGGCACGGCATTCGGGCGACCATCTCGACCGCGCTCAACGAGATGGGCTACCTCAAAGCT 4434 Query 65052 TTGATCGAGGGCCAGCTTTCCCATGCCGATCCC-AACAAGACGCGGGCGGCATACAACCA 65110 | | | || | || || || ||| |||||||| | |||| | | | || |||||||| Sbjct 4435 TGGGTGGACGCGCAACTCTCGCATACCGATCCCGATCAAGTC-AGTTCAGCCTACAACCA 4493 Query 65111 TGCCGCGCACGTTGAGCGTCGAAGGGCGATGATGCAAGACTGGGCTGA 65158 |||| | |||| |||| || || |||||||||| ||||||||||| Sbjct 4494 CGCCGAGTACGTCGAGCAGCGCCGGACGATGATGCAGGACTGGGCTGA 4541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 204282202492732