Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_006820.1 Length=196280 Score E Sequences producing significant alignments: (Bits) Value seq465744 89.7 6e-13 seq415711 89.7 6e-13 seq1657888 84.2 3e-11 >seq465744 Length=8657 Score = 89.7 bits (98), Expect = 6e-13 Identities = 70/84 (83%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 165219 TGCCCAAGTGGCGGAATTGGTAGACGCGCTGGGTTTAGGTTCCAGTGAATTAATTCGTGG 165278 |||||| |||||||||||||||||||| || | || |||| | || || | | |||||| Sbjct 3746 TGCCCAGGTGGCGGAATTGGTAGACGCACTAGTTTCAGGTACTAGCGAGTAACATCGTGG 3687 Query 165279 AGGTTCAAGTCCTCTCTTGGGCAC 165302 |||||| ||||||||| ||||||| Sbjct 3686 AGGTTCGAGTCCTCTCCTGGGCAC 3663 >seq415711 Length=2026 Score = 89.7 bits (98), Expect = 6e-13 Identities = 65/74 (88%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 164733 GGGGAATTAGCTCAGTTGGTAGTAGCGTTTGCTTTGCAAGCAAAATGTCAGGAGTTCGAG 164792 |||| |||||||||||||||| |||| ||||||||||||| |||||||||||||||| Sbjct 1173 GGGGCCTTAGCTCAGTTGGTAG-AGCGCCTGCTTTGCAAGCAGGATGTCAGGAGTTCGAG 1115 Query 164793 TCTCCTATTCTCCA 164806 ||||||| ||||| Sbjct 1114 TCTCCTAGGCTCCA 1101 >seq1657888 Length=995 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 120240 CGGGGTGTAGCTCAGTTTGGTAGAGCACTCGCTTTGGGAGCGAGTGGCCGTAGGTTCGAA 120299 ||||| ||||||||| |||||||||| | ||||||||||||| | | || ||||||||| Sbjct 779 CGGGGCGTAGCTCAGCTTGGTAGAGCGCCCGCTTTGGGAGCGGGAAGTCGCAGGTTCGAA 838 Query 120300 TCCTATCACCCCGA 120313 |||| || |||||| Sbjct 839 TCCTGTCGCCCCGA 852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 614941376860800