Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_006938.1 Length=63649 Score E Sequences producing significant alignments: (Bits) Value seq642390 111 6e-20 seq1606471 107 8e-19 >seq642390 Length=3645 Score = 111 bits (122), Expect = 6e-20 Identities = 130/176 (74%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 9399 CTCTGGGAGATGATCATGCGGTCCACGTGGGACTGGGCCGAGCCCGGCACCCTGTTCATC 9458 || |||||| |||||||| || | | |||| |||||||| |||| ||||||| | Sbjct 1287 CTGTGGGAGCGCATCATGCGTTCGGCCTACGACTATGCCGAGCCGGGCATCCTGTTCCTG 1346 Query 9459 GACCAGATCAACCGCATGAACAATCTCAAGTACTGCGAGACCATCGCCGCCACCAATCCC 9518 | || |||||| ||||| || | ||||||||||||||| | |||||||| ||| Sbjct 1347 GGCCGCATCAACGAGGACAACAACCTGCATTACTGCGAGACCATCACGGCCACCAACCCC 1406 Query 9519 TGCGGCGAGCAGCCCCTCCCACCGTACGGTGCCTGCCTCTTGGGCTCCTTCAACCT 9574 ||||||||||||||||| || | || || |||| | ||||| || ||| ||| Sbjct 1407 TGCGGCGAGCAGCCCCTGCCTGCCTATGGCTGCTGCGACCTGGGCCCCGTCATCCT 1462 >seq1606471 Length=311 Score = 107 bits (118), Expect = 8e-19 Identities = 128/174 (74%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 9399 CTCTGGGAGATGATCATGCGGTCCACGTGGGACTGGGCCGAGCCCGGCACCCTGTTCATC 9458 || ||||| |||||||| ||||||| || | |||||||||||| | | |||| Sbjct 266 CTGTGGGATGTGATCATGTCCTCCACGTATGATTTTGCCGAGCCCGGCTTCATCCTCATT 207 Query 9459 GACCAGATCAACCGCATGAACAATCTCAAGTACTGCGAGACCATCGCCGCCACCAATCCC 9518 || || |||| |||||||| | || |||||| |||||| ||||||||| || Sbjct 206 GATAAGGTCAATGAGATGAACAACAACTGGTTCTGCGAAACCATCCGCGCCACCAACCCT 147 Query 9519 TGCGGCGAGCAGCCCCTCCCACCGTACGGTGCCTGCCTCTTGGGCTCCTTCAAC 9572 || ||||||||||| || || || || || |||||||| |||| ||| ||||| Sbjct 146 TGTGGCGAGCAGCCGCTGCCGCCTTATGGCGCCTGCCTGCTGGGTTCCATCAAC 93 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 199435062013670