Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq649786 232 8e-56 seq656496 91.5 2e-13 seq360635 84.2 3e-11 seq1631541 82.4 9e-11 seq271499 82.4 9e-11 >seq649786 Length=1608 Score = 232 bits (256), Expect = 8e-56 Identities = 565/853 (66%), Gaps = 24/853 (3%) Strand=Plus/Plus Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072 ||||| ||||| ||||| || || || || |||||||||||||| | ||| || || | Sbjct 41 TTTTGATATTCGCCCACCCGCTTCTCAAAGAAATTAGTTTTTCCCTGCAAGGAAATCATG 100 Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCC---AATTCAGAA 33129 ||||| || || || |||||| ||||||||| ||||| ||| || || Sbjct 101 TCCATAAAGTCGAAAGGATTGACGGCATTATAAACTTTTTG---TCCGGTTAACTCCACC 157 Query 33130 ATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATA 33189 | ||| | || || || || ||||||||| |||| | |||||| || || Sbjct 158 AGCAAACGGTCTGCCACAAACTCTATATATTGACACATCGAAGCGGCATTCATCCCGATT 217 Query 33190 AGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATA 33249 | | || ||||| | | || | ||| || | |||||| ||| || ||| | ||| Sbjct 218 AAACTCACGGGAAGCGAATCGGTCACAAACTCCTTTTCAATTACTACGGCGTCTTTGATA 277 Query 33250 ATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAA-ACATCAA--ACAT 33306 || | || |||| | || || | | |||||| | || || ||| Sbjct 278 ATTTCAATCACCCGCTCTTTTGGCAACGGCTGAATCACGTGTTTAGTATATAAATGACAG 337 Query 33307 GCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCG 33366 || |||||||| |||| || ||||| | || | ||| || ||||| | | || Sbjct 338 GCAAAATCGCAATGCAAGCCTTCGTCGCGCGAGATCAATTCATTCGAAAAGCTCAAGCCC 397 Query 33367 GGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATT 33426 ||||| ||||| || || || |||||||| ||||| || || || || ||||| || Sbjct 398 GGCATCAGGCCGCGTTTCTTCAGCCAAAAGATGGAGCAAAACGAACCCGAGAAGAAAATC 457 Query 33427 CCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGTATCCAC 33486 ||||| || || ||||| ||||| || | |||| | || Sbjct 458 CCTTCCACGGCGGCAAAAGCAATCAGACGCTCTTGANNNNNNNNNNNNNNNNA-----AC 512 Query 33487 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 33546 ||||||||||| |||||||| || || ||||||||| ||||| | || ||| Sbjct 513 ------GCCCAATCGGCTTTCTTTTTCACGCATTCCATCGTTTCAATGGCGTGAAGCAGA 566 Query 33547 TAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAA 33606 || ||| || | ||||| || || ||||| || | || ||| |||| || Sbjct 567 CGGTCTTTCTCCTGCGCGTCTTTCACGTAGGTATCAATGAGCAGCGAATAGGTTTCGGAG 626 Query 33607 TGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACT 33666 || || ||||||| ||| || || || ||||||||| || |||| || ||| || ||| Sbjct 627 TGGATATTTTCAACGGCAATTTGGAAGCCGTAGAAAAATTTAGCTTCCGTATATTGCACT 686 Query 33667 TCTG-TACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 33725 || | ||||||| ||||||||| |||||| || || |||||||| ||||| |||||||| Sbjct 687 TCCGACACAAAAT-GTTCCGCCAGATTTTCGTTTACAATTCCGTCGCTGGCGGCAAAAAA 745 Query 33726 CGCCAATACATGTTTTATAAAATATTTTTCGTC-TGGTGTTAGTTTATTCCAATCATTGA 33784 |||||| || || | ||||||| | || || |||| | || | | |||||| || | Sbjct 746 CGCCAAAACGTGCGTGATAAAATGTCGCTCATCGTGGTTTAAGCCT-TGCCAATCGTTCA 804 Query 33785 TATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACA 33844 ||||| | || ||| | |||||| | |||||||| || || || | || || | Sbjct 805 AATCTTGACTTAAATCAATTTCTTCAGCCGTCCAAAAGCTGGCTTCGGCTTGCTTGTAAA 864 Query 33845 TGTTCCAGATGTC 33857 ||||| ||||| Sbjct 865 ATTTCCAAATGTC 877 >seq656496 Length=912 Score = 91.5 bits (100), Expect = 2e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 63450 CCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCC 63509 |||||||| ||||| ||| ||||||||| | ||| ||||| | ||| ||||| Sbjct 421 CCGGAGATGTAGCTGCCAGAGGCACGAATGCAATGAATATTCAGACCAACTCCACCTGCA 480 Query 63510 ATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCG 63569 | || || || | ||| ||| |||| || ||||||||||| || || ||||| ||||| Sbjct 481 CTCTTTGAAATAAGTGCACATTGTTTCAAAGTGTCATAGATTCCTTCAATGCTGTCATCA 540 Query 63570 ATCATGTTAAGTAGAAAACAGCT 63592 |||||| | ||||||||||| Sbjct 541 ATCATGGACAACAGAAAACAGCT 563 >seq360635 Length=7270 Score = 84.2 bits (92), Expect = 3e-11 Identities = 102/139 (73%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 62336 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 62395 ||| || ||||||| ||||| || | | ||| || || |||||||| || || || | Sbjct 620 TACCTGGTATTCTCCTGACAACACCCGTCTAGTATAGATGTTACTGGTGTAAGGCTCAAA 561 Query 62396 CGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 62455 ||| ||||||||||| ||||||||||||||||| ||||| || | ||||| | Sbjct 560 ACTTTCACAGTTTCCCAAAATCTGAGCAGTTGATGCAGTTGGCATCGGAGACACCAGCAG 501 Query 62456 ACTATTTCTAAGACCGTAT 62474 |||||| | | |||||| Sbjct 500 ACTATTGCGCACTCCGTAT 482 >seq1631541 Length=403 Score = 82.4 bits (90), Expect = 9e-11 Identities = 239/366 (65%), Gaps = 9/366 (2%) Strand=Plus/Plus Query 62733 CCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAA 62792 || || ||||| || | ||| | | |||| ||| || ||||| | || || || Sbjct 3 CCGATGCCGATGGGGCGATGGCGCATATTGGAGTTTCGCGCTTCCTCCACCGGGTAGTAG 62 Query 62793 TTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAG---T 62849 || | ||||| | |||||||||||| | ||| |||||| | || | || | Sbjct 63 TTCACGTCTATCACTTTATTGAGATTGCGCGTAATCACTTTGGTGATTTCATAAAGGCGT 122 Query 62850 TTGAGAAAATCAAATCGCCCATCTA---TTACAAACATGTTCAAGGCAACAGATGCCAGA 62906 ||| ||||||| | || ||| ||| |||| | |||||||| || |||| Sbjct 123 TTGT---AATCAAACCTTCCTTCTGCGTTTATAAACTTAGGCAAGGCAATGGAGGCCAAG 179 Query 62907 TTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTA 62966 || ||||| || || || | | | | ||||| ||| || || ||||||||||| || Sbjct 180 TTGCAAACCGCCACTTCGTCGGGAGAAGTATATTCTATAATTTCCGTGCAAAGATTGCTT 239 Query 62967 CACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGA 63026 |||| || || || |||| ||| ||||| ||||| || || || || ||||| Sbjct 240 GACTTTATCGTGCCCAAATGTTGCTGATTGCTCTTGCGATTGGCGGCGTCTTTGTAAAGC 299 Query 63027 ATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCC 63086 || | || || || ||||| || || | ||| | ||| | ||| | || | ||| Sbjct 300 ATATACGGCGTTCCTGTTTCTATTTGCGCTTCCAAAATTTCGAACCACAAATCTTGCGCC 359 Query 63087 TTTATT 63092 |||||| Sbjct 360 TTTATT 365 >seq271499 Length=3361 Score = 82.4 bits (90), Expect = 9e-11 Identities = 89/118 (75%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 62937 TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTA 62996 |||| || |||||||||||| ||||| || || | || || || | || || ||||| Sbjct 2310 TATTCTACTATCTCAGTGCAGAGATTGCTGCAGGTAATGGTCCCCAGGTTCTGCTGATTG 2369 Query 62997 CTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAG 63054 |||||| ||||| ||||| || || || || |||| |||||||| ||| |||||| Sbjct 2370 CTCTTTCGATTACAGGCATCTTTGTAGAGCATATATGGTGTACCAGTCTCAGTCTGAG 2427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610024728775320