Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq307809 183 8e-41 seq649786 123 6e-23 seq644427 118 3e-21 seq1631541 111 4e-19 seq533080 93.3 1e-13 >seq307809 Length=2175 Score = 183 bits (202), Expect = 8e-41 Identities = 396/589 (67%), Gaps = 9/589 (2%) Strand=Plus/Minus Query 111308 AACTCATTTTCCACTTCTCACAACAAAGCGAACATATTGGAAGGGAATTGTCGAAGAACT 111367 ||||| |||||| ||||| ||||||||||| | ||||| || |||| ||||| || Sbjct 1246 AACTC-TTTTCCTCTTCTGACAACAAAGCGCGTCTTCTGGAAAGGCGTTGTGGAAGAGCT 1188 Query 111368 TCTGTGGTTTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCAAAAAATGTAAAAAT 111427 ||||||| ||||| ||| |||||||| || || | || | |||||||| | || Sbjct 1187 GTTGTGGTTCATTCGAGGATCAACAAATGCCAAGGAGTTGGCTGAGAAAAATGTCCACAT 1128 Query 111428 TTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGACAACGAAGA 111487 ||||| | ||||| ||||| | || || || | ||||| | ||| || || Sbjct 1127 CTGGGACGCCAATGGCTCACGAGCATTCCTCGACAAAATTGGTTTAAACGATCGTGAGGA 1068 Query 111488 AGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAAC 111547 ||| || || ||||| || || || ||||| ||||| || | || || || |||||| Sbjct 1067 AGGCGACCTTGGACCGGTGTATGGTTTTCAGTGGCGTCATTCAGGCGCTGATTACAAAGA 1008 Query 111548 CATGCACGACTCAT-ATGATTC---ACAGGGAACTGATCAATTACAGAATGTCATTGATC 111603 |||||| |||| || || | ||||| ||||| || | |||| ||||| Sbjct 1007 CATGCA----TCATGATTATACTGGGCAGGGTGTGGATCAGCTAAAAGATGTGATTGAGA 952 Query 111604 AAATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGCAT 111663 | ||||| | |||| | | || || |||||| |||| ||||| || || | Sbjct 951 AGATTAAAAGTTCACCAAATGACAGACGAATGATTATGTGTGCGTGGAATCCGAAAGATC 892 Query 111664 TGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGTACACGACGGGA 111723 | |||||||| || |||||||| || | || ||||| ||||| | |||| Sbjct 891 TTCCCAAAATGGCGCTGCCACCATGCCACGCTCTGGTGCAGTTCTATGTTGCCAACGGAG 832 Query 111724 TGCTTTCATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATA 111783 || || |||| |||| ||||| || || ||| ||||||| |||||||| ||||| | Sbjct 831 AACTCTCGTGCCTGTTGTACCAGCGCTCGGCAGATGTTGGTCTCGGTGTTCCATTTAACA 772 Query 111784 TTGCAAGTTACGCACTACTTACTTGCTTAATCGCTCATTTTACAAATCTCAAACCGGGTG 111843 |||| || ||||| | | || | | || |||||| | || || | ||| || | Sbjct 771 TTGCCAGCTACGCTTTGTTGACATATATGATTGCTCATGTGACTGGACTAAGACCAGGAG 712 Query 111844 AATTCATTCACGTTATCGGAGATGCGCATGTTTACACAAACCACATTGA 111892 | ||||| ||| || || ||| | || |||| || |||||||| Sbjct 711 AGTTCATCCACAACATGGGTGATACTCACATTTATCTGAATCACATTGA 663 >seq649786 Length=1608 Score = 123 bits (136), Expect = 6e-23 Identities = 308/463 (67%), Gaps = 10/463 (2%) Strand=Plus/Minus Query 22489 GAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCA 22548 || ||||| ||||| ||||| | || ||||| |||||||| || || | ||||| | Sbjct 489 GAGCGTCTGATTGCTTTTGCCGCCGTGGAAGGGATTTTCTTCTCGGGTTCGTTTTGCTCC 430 Query 22549 ATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATT 22608 ||||||||||| || ||||| | | |||||||| | | ||||| ||||| || || Sbjct 429 ATCTTTTGGCTGAAGAAACGCGGCCTGATGCCGGGCTTGAGCTTTTCGAATGAATTGATC 370 Query 22609 AGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCTATATCGGAATCATATCATT 22668 || || || || | ||| ||||||||| ||| ||||| || || | ||| Sbjct 369 TCGCGCGACGAAGGCTTGCATTGCGATTTTGCCTGTCATTTATATACTAAACACGTGATT 310 Query 22669 CATAAACTTCCATATGAAACTGTACTTGATATTATTACAAATGCAGTTGAACTTGAACGT 22728 || | ||| | || || |||| ||||| | | | || || | | ||||| Sbjct 309 CAGCCGTTGCCAAAAGAGCGGGTGATTGAAATTATCAAAGACGCCGTAGTAATTGAAAAG 250 Query 22729 CTATTTATTTGCGAGGCGTTACCAGTAAGTCTCATTGGTATCAATGCCGAATCAATGAGT 22788 ||| | ||| || | || || ||| | || || || ||||||| || ||| || Sbjct 249 GAGTTTGTGACCGATTCGCTTCCCGTGAGTTTAATCGGGATGAATGCCGCTTCGATGTGT 190 Query 22789 ACATATATTAAATTTGTTGCAGATCGTCT----ATTAATTTCACTCGGTTATGCAAAGCA 22844 |||||| | ||||| ||||| ||| | | | || || ||| | ||| Sbjct 189 CAATATATAGAGTTTGTGGCAGACCGTTTGCTGGTGGAGTTAAC-CGGACA---AAAAGT 134 Query 22845 TTATAACGTCGTTAATCCATTTGAATGGATGGAACTTATTTCACTTG-AAGGAAAGACCA 22903 |||||| | ||| ||||| || || | ||||| | ||||| |||| | ||||| || | Sbjct 133 TTATAATGCCGTCAATCCTTTCGACTTTATGGACATGATTTC-CTTGCAGGGAAAAACTA 75 Query 22904 ATTTCTTCGAAAAAAGAGTTGGTGAATACCAAAAAGCAGGTGT 22946 ||||||| || || | || || ||||| ||||| ||||| || Sbjct 74 ATTTCTTTGAGAAGCGGGTGGGCGAATATCAAAAGGCAGGCGT 32 >seq644427 Length=940 Score = 118 bits (130), Expect = 3e-21 Identities = 149/202 (74%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 363775 CCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGC 363834 |||||||| || ||||||| || || | || || ||||| || || ||||| ||| Sbjct 201 CCCATGCTCCGCAATTTTGACATGACGGCACGCTATGTAGACCAAGGCGGCGGAAAACGC 142 Query 363835 AAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAG 363894 ||||| ||||| || ||||| || || || |||||||||||||| ||| | ||| Sbjct 141 AAAGGAAGTTTTGCCATTTATCTAGAACCCTGGCACGCCGATATTTTTGATTTTTTGGAG 82 Query 363895 CTCCGGAAAAA-CACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTG 363953 | |||||| ||| || || || ||| |||| ||||| ||||| || ||||| ||||| Sbjct 81 TTAAAGAAAAATCAC-GGCAAGGAAGAAATGCGGGCACGCGATCTTTTTTATGCGCTTTG 23 Query 363954 GGTTTCTGACCATTTTATGAAG 363975 | || | |||| ||||||||| Sbjct 22 GATTCCCGACCTATTTATGAAG 1 >seq1631541 Length=403 Score = 111 bits (122), Expect = 4e-19 Identities = 261/389 (67%), Gaps = 9/389 (2%) Strand=Plus/Minus Query 364075 TATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATC 364134 |||||| || ||||||||||| || | ||| || || | | ||||| | || Sbjct 394 TATGAAAAAGAAGGAAAGGCTCGCAAAAAAATAAAGGCGCAAGATTTGTGGTTCGAAATT 335 Query 364135 ATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGC 364194 |||| |||| || || |||||||| || |||||| | |||||||| | ||| ||| Sbjct 334 TTGGAAGCGCAAATAGAAACAGGAACGCCGTATATGCTTTACAAAGACGCCGCCAATCGC 275 Query 364195 AAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATT 364254 ||| ||| ||||| || | || || || || ||||| || || || || ||||| Sbjct 274 AAGAGCAATCAGCAACATTTGGGCACGATAAAGTCAAGCAATCTTTGCACGGAAATTATA 215 Query 364255 GAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCG 364314 ||||| || |||||||||| || || || ||| | || || || || | || | Sbjct 214 GAATATACTTCTCCCGACGAAGTGGCGGTTTGCAACTTGGCCTCCATTGCCTTGCCTAAG 155 Query 364315 TTTGTAAA---AGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTA--TCATG 364369 ||| |||| ||| || | ||||| || | | |||||||| | ||| | | || Sbjct 154 TTTATAAACGCAGAAGGAAGGTTTGATTACAAACGCCTTTATGAAATCACCAAAGTGAT- 96 Query 364370 CTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CGAG 364428 ||| |||||||| | || || || ||| ||| || || || | ||||| ||| Sbjct 95 -TACGCGCAATCTCAATAAAGTGATAGACGTGAACTACTACCCGGTGGAGGAAGCGCGA- 38 Query 364429 CGTTCTAATATGCGTCATCGCCCGATTGG 364457 || |||||||| |||||||| || || Sbjct 37 AACTCCAATATGCGCCATCGCCCCATCGG 9 >seq533080 Length=1015 Score = 93.3 bits (102), Expect = 1e-13 Identities = 153/218 (70%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 363838 GGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTC 363897 || || ||||| || || || || || |||||||| || ||||| ||||| || Sbjct 780 GGTGCTTTTGCCATTTACCTGGAACCATGGCATGCCGACATCTTTGACTTTCTGGATTGT 721 Query 363898 CGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTT 363957 |||||||| || || || || || ||| ||||| || || ||||||||||| ||| || Sbjct 720 CGGAAAAATACAGGCAAGGAAGAGCAGCGAGCACGAGACCTATTCTATGCACTATGGATT 661 Query 363958 TCTGACCATTTTATGAAGCGCGTGGAG-GCA--GGTAAGAATTGGTCACTCTTTTGCCCA 364014 | || || |||||||| || ||| ||| ||| | ||| |||| | || || Sbjct 660 CCAGATTTATTCATGAAGCGAGTCGAGAGCAATGGT---GACTGGACACTGATGTGTCCT 604 Query 364015 CACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGA 364052 || || |||||||| ||| | | || |||||||| || Sbjct 603 CATGAGTGTCCAGGCCTTCACAAAGTTTGGGGTGATGA 566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1275640796850114