Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq649786 89.7 5e-13 >seq649786 Length=1608 Score = 89.7 bits (98), Expect = 5e-13 Identities = 294/448 (66%), Gaps = 8/448 (2%) Strand=Plus/Minus Query 46153 GAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCA-GTTTTGCCGC 46211 |||||| || | || ||||| ||||| || | || || || || ||||||| | Sbjct 489 GAGCGTCTGATTGCTTTTGCCGCCGTGGAAGGGATTTTCTTCTCGGGTTCGTTTTGCT-C 431 Query 46212 CATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGAT 46271 |||||||| | || | ||| | ||||| ||| ||| ||| || || |||| Sbjct 430 CATCTTTTGGCTGAAGAAACGCGGCCTGATGCCGGGCTTGAGCTTTTCGAATGAATTGAT 371 Query 46272 ATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACTCGCGTGCA 46331 ||||||||||| ||| ||||| || ||||| |||| | |||| | | |||| Sbjct 370 CTCGCGCGACGAAGGCTTGCATTGCGATTTTGCCTGTCATTTATATACTAAACACGTGAT 311 Query 46332 CGACAAGCTTGCGCCCGACACCG--TGCTGAGCATGTTCAAGGAGGCGGTGGCCATTGAG 46389 | | |||| | | | || || | || |||| || || || | ||||| Sbjct 310 TCAGCCG-TTGC-CAAAAGAGCGGGTGATTGAAATTATCAAAGACGCCGTAGTAATTGAA 253 Query 46390 AAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAGTCAATG 46449 ||||||||| | || | | || |||| | | || ||||| || || ||| Sbjct 252 AAGGAGTTTGTGACCGATTCGCTTCCCGTGAGTTTAATCGGGATGAATGCCGCTTCGATG 193 Query 46450 TGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCCGAAGCAT 46509 || | || || |||||||| || ||||| |||| ||| || || ||| | | || | Sbjct 192 TGTCAATATATAGAGTTTGTGGCAGACCGTTTGCTGGTGGAG-TTAACCGGACAAAAAGT 134 Query 46510 TT-TCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAA 46568 || | | || |||||| || || |||||| ||| || ||| || |||| |||||||| Sbjct 133 TTATAATGCCGTCAATCCTTTCGACTTTATGGACATGATTTCCTTGCAGGGAAAAACTAA 74 Query 46569 TTTTTTCGAAAAGCGCGTCGGCGAGTAT 46596 ||| || || ||||| || ||||| ||| Sbjct 73 TTTCTTTGAGAAGCGGGTGGGCGAATAT 46 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462221325175680