Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_008194.1 Length=74483 Score E Sequences producing significant alignments: (Bits) Value seq652898 291 4e-74 seq636339 100 1e-16 >seq652898 Length=17576 Score = 291 bits (322), Expect = 4e-74 Identities = 521/755 (69%), Gaps = 7/755 (1%) Strand=Plus/Plus Query 65403 CCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGG 65462 |||||||||| | | |||||| ||| |||||| | ||||| || | ||||||| Sbjct 16678 CCACCGGCTCGCTGGGCCTGGACATCGCGCTGGGCGTGGGGGGCCTGCCCCGTGGCCGGG 16737 Query 65463 TGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTATGTCTCCACGCGGTGG 65522 |||| |||||||| ||||| ||||| || || ||| | || || || || | | | | Sbjct 16738 TGGTTGAAATCTATGGCCCGGAATCCTCGGGCAAGACCACGCTGGCGCTGCAGGTGATCG 16797 Query 65523 CCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACC 65582 || | ||| ||| || |||| | ||||| | |||| || ||||| | |||||| Sbjct 16798 CCGAGATGCAAAAGCAGGGCGGCACCTGCGCCTTCGTCGATGCGGAGCATGCGCTGGACG 16857 Query 65583 CTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACA 65642 | ||||| | ||||| ||| | || | |||| || | ||||| |||| Sbjct 16858 TGCAATACGCGCAAAAACTCGGCGTGCAACTGTCCGACCTGCTGATCAGCCAGCCCGACA 16917 Query 65643 CTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCG 65702 | ||||| || || ||||||||||| ||| ||| || || |||| | | | | Sbjct 16918 CCGGCGAACAAGCGCTGGAGATCGTCGACAGCCTGGTGCGCTCCGGCGCGGTCGACCTGA 16977 Query 65703 TCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGG 65762 |||| || ||||| ||||| |||||| ||| ||||| ||||||||||||| || | Sbjct 16978 TCGTGGTGGACTCGGTGGCCGCCCTGACGCCCAAGGCCGAAATCGAAGGCGACATGGGCG 17037 Query 65763 ACAGTCACGTCGG-CCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACTGGC 65821 || | | | ||| |||||| ||||| || ||| ||||| ||||||||||||| | Sbjct 17038 AC-GCCCTGCCGGGCCTGCAAGCGCGGCTGATGAGCCAGGCATTGCGCAAGCTCACCGCG 17096 Query 65822 ACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGC 65881 || ||| | |||||| || ||| |||||||| | ||| |||||||||| Sbjct 17097 ACGATCAAGAAGACCAACTGCATGGTCGTCTTCATCAACCAGATCCGCATGAAGATCGGC 17156 Query 65882 AACGTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCC 65941 || | | |||| ||| |||||||| |||||||| || | | |||||||||| Sbjct 17157 GTGATGTTCGGCAGCCC---CGAAACCACCACCGGCGGCAATGCGCTCAAGTTCTACGCC 17213 Query 65942 TCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGC 66001 || || ||| |||| |||| |||| || |||| ||| | |||||||| || | ||| Sbjct 17214 TCGGTGCGCCTGGACATCCGCCGCACCGGCACCATCAAGAAGGGCGATGAAGCCATTGGC 17273 Query 66002 AACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAG 66061 ||| ||| ||| ||||| ||||||||||| | ||||||| | | ||||||| Sbjct 17274 AACGAAACCAAGGTCAAGGTGGTCAAGAACAAAGTCAGCCCGCCGTTCAAGACCGCCGAG 17333 Query 66062 TTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCGTG 66121 ||| | || ||| || || |||||| || |||| |||| || ||||| ||| |||| Sbjct 17334 TTCGACATCCTGTTTGGCGAAGGCATCAGCCGCGAGGGCGAAATCATCGACATGGGCGTG 17393 Query 66122 -TCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGT 66155 ||| | | ||| | |||||||||||||||| Sbjct 17394 AACGCCAAG-ATCGTGGAAAAGTCGGGCGCCTGGT 17427 >seq636339 Length=1141 Score = 100 bits (110), Expect = 1e-16 Identities = 90/113 (80%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 65709 TTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTC 65768 ||||||| ||||| ||||||||||| || ||| | |||||||| || ||||| || Sbjct 515 TTGACTCGGTGGCCGCCCTGGTGCCCAAGGCGGAGTTGGAAGGCGAGATGGGGGAAAGCA 456 Query 65769 ACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACTGGC 65821 | | || |||| |||||||||||||||||||| ||||||||||||| ||| Sbjct 455 AAATGGGGTTGCAGGCGCGCCTCATGTCGCAGGCGTTGCGCAAGCTCACCGGC 403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 233402668708468