Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq649786 233 2e-56 >seq649786 Length=1608 Score = 233 bits (258), Expect = 2e-56 Identities = 586/884 (66%), Gaps = 25/884 (3%) Strand=Plus/Plus Query 92803 TTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTCCAAAGATATCGAA 92862 ||||| ||||| || || || ||||||||||| || ||||| | ||| || ||| Sbjct 41 TTTTGATATTCGCCCACCCGCTTCTCAAAGAAATTAGTTTTTCCCTGCAAGGAAATCATG 100 Query 92863 TTCACTA-GT-GATTGGATTCTTGGCGTTATAATACTTTTCACCGATCAACTCGTACAAT 92920 | || | || || ||||| ||| |||||| |||| ||| | ||||| || Sbjct 101 TCCATAAAGTCGAAAGGATTGACGGCATTATAAACTTTTTGTCCGGTTAACTCCACCAGC 160 Query 92921 AATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGA 92980 || | || || ||||| ||||| || ||| ||||| || | |||||| || | | | Sbjct 161 AAACGGTCTGCCACAAACTCTATATATTGACACATCGAAGCGGCATTCATCCCGATTAAA 220 Query 92981 CGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATT 93040 | || || || | ||||||| || || || || ||||| ||||| ||||| | ||| Sbjct 221 CTCACGGGAAGCGAATCGGTCACAAACTCCTTTTCAATTACTACGGCGTCTTTGATAATT 280 Query 93041 TCTATTACTCTACTATTTGGTGGTTTTTGTACGACATAATT-GTACATTAAGCAC--GCA 93097 || || || | ||||| || | || | || ||| || || || ||| Sbjct 281 TCAATCACCCGCTCTTTTGGCAACGGCTGAATCACGTGTTTAGTATATAAATGACAGGCA 340 Query 93098 AAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGT 93157 || ||| ||| || |||||||| || || ||||| ||||| || | || || || Sbjct 341 AAATCGCAATGCAAGCCTTCGTCGCGCGAGATCAATTCATTCGAAAAGCTCAAGCCCGGC 400 Query 93158 AACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTA-CCAGaaaaaaaTATACC 93216 | ||| || |||||||| |||||||| || || ||||||| | || || || || || || Sbjct 401 ATCAGGCCGCGTTTCTTCAGCCAAAAGATGGA-GCAAAACGAACCCGAGAAGAAAATCCC 459 Query 93217 TTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCA 93276 ||||||||| ||||| || | | ||| || ||| Sbjct 460 TTCCACGGCGGCAAAAGCAATCAGACGCTC--------TTGANNNNNNNNNNNNNNNN-- 509 Query 93277 TTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAG 93336 || |||||||||||||| || || | || | ||||| || |||| || || Sbjct 510 ----AACGCCCAATCGGCTTTCTTTTTCACGCATTCCATCGTTTCAATGGCGTGAAGCAG 565 Query 93337 GTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGA 93396 ||| ||| | || ||| | ||| ||||| || | ||| ||||| |||| || Sbjct 566 ACGGTCTTTCTCCTGCGCGTCTTTCACGTAGGTATCAATGAGCAGCGAATAGGTTTCGGA 625 Query 93397 ATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCAC 93456 |||| ||| || | ||||||||||| ||||||||| || |||||||||| ||||| Sbjct 626 GTGGATATTTTCAACGGCAATTTGGAAGCCGTAGAAAAATTTAGCTTCCGTATATTGCAC 685 Query 93457 TT-CTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaa 93515 || | | ||||| | || | |||||||| || || || || ||| || ||||||| Sbjct 686 TTCCGACACAAAATGT-TCCGCCAGATTTTCGTTTACAATTCCGTCGCTGGCGGCAAAAA 744 Query 93516 aaGCCAATATATGCTTTATAAAATGTTTCTCATCAT-CTTTAAGCTTATCCCAATCGGAT 93574 | ||||| | ||| | ||||||||| |||||| | ||||||| | | ||||||| Sbjct 745 ACGCCAAAACGTGCGTGATAAAATGTCGCTCATCGTGGTTTAAGCCT-TGCCAATCGTTC 803 Query 93575 AGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTAC 93634 | ||||| | ||| | |||||| | |||||||| ||||| |||| ||||| Sbjct 804 AAATCTTGACTTAAATCAATTTCTTCAGCCGTCCAAAAGCTGGCTTCGGCTTGCTTGTAA 863 Query 93635 ATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACG 93678 | | ||| ||||| || | ||| ||||| | |||||| || Sbjct 864 AATTTCCAAATGTCGTGGTGGGCAATGGGAAAGAGGACAAAGCG 907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545309230839480