Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq307809 156 4e-33 >seq307809 Length=2175 Score = 156 bits (172), Expect = 4e-33 Identities = 290/423 (69%), Gaps = 2/423 (0%) Strand=Plus/Plus Query 20024 TATACTGCCATTTCCATACGAATGGTAGGATGCGGGCAGTAGTCCACCAGTCTAAAATCA 20083 || ||||||||| |||| | || | |||||| || ||| || | |||| ||| || Sbjct 510 TAGACTGCCATTGCCATTTGTATCGGAGGATGTGGATTGTAATCAAACAGTTCAAAGTCT 569 Query 20084 TCAGGTGTAAACTCTTCCATGGAAGAAACAGACCGGAGTATCTCCAGGCGCGGAAAGGGA 20143 ||| | || || || ||| |||| || || |||| || ||| ||||| || Sbjct 570 TCATAGTTGAAGTCATCAATGTCTTTAACATTTCGTAGGATCTTCAAGCGAGGAAATGGC 629 Query 20144 CGTGGAGTGCGCGTCAGCTGCAGCCGTAGTGGCTCTATATGCGTTTTGTAGATGTGGGCA 20203 | ||| |||| | |||||| | | || || || || | || ||||| | | Sbjct 630 CTTGGCTTGCGTTTTAGCTGCTCCTTCAACGGTTCAATGTGATTCAGATAAATGTGAGTA 689 Query 20204 TCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATGAGCAAGCATATAA 20263 || |||| |||| || ||||| || ||||| || ||||| |||||||||| |||||| Sbjct 690 TCACCCATGTTGTGGATGAACTCTCCTGGTCTTAGTCCAGTCACATGAGCAATCATATAT 749 Query 20264 GTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCCCGACCTC 20323 || || | | ||||||||||||||||| ||||| || | ||| | ||| |||| | | Sbjct 750 GTCAACAAAGCGTAGCTGGCAATGTTAAATGGAACACCGAGACCAACATCTGCCGAGCGC 809 Query 20324 TGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGACATAACA-AGTGACA 20382 || |||| | | || || || || |||| || ||||| || || || | | ||| || Sbjct 810 TGGTACAACAGGCACGAGAGTTCTCCGTTGGCAACATAGAACTG-CACCAGAGCGTGGCA 868 Query 20383 GGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACATAATGATTCTTCT 20442 || || |||||||| | | || ||| ||||||||||||||||| |||| ||| Sbjct 869 TGGTGGCAGCGCCATTTTGGGAAGATCTTTCGGATTCCACGCACACATAATCATTCGTCT 928 Query 20443 ATC 20445 || Sbjct 929 GTC 931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432448956194710