Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_009382.1 Length=38760 Score E Sequences producing significant alignments: (Bits) Value seq656171 313 6e-81 seq674120 86.0 2e-12 >seq656171 Length=12809 Score = 313 bits (346), Expect = 6e-81 Identities = 693/1029 (67%), Gaps = 36/1029 (3%) Strand=Plus/Minus Query 794 GCCGGCGCTGCGCCTGTACGCGTTGGTCGATGGTGCGCAATACCAGCTGCAGATCGGCCG 853 ||| |||||||| || ||||| |||||||||| | ||| |||||| || || || Sbjct 3267 GCCTGCGCTGCGGCTCTACGCTCTGGTCGATGGCGTGCAGTACCAGACCCAACTCTGCAA 3208 Query 854 GCCGATCCTGCCGCGGTCCTGCATGGCCTCGCTGTTCGAGGGCACGGCCGACGCGCCGTT 913 || ||| |||| | | | || | || |||||| || || | ||| || || | Sbjct 3207 GCGATTCCAGCCGGGCAGCGGGCTGTTCCCGTTGTTCGCTGGAACACCAGACTCGGCGCT 3148 Query 914 GGCCCATGCCGGCCCCTGGCTGGTCGATGTCGA----GCAGGCGGATAACGAGCTGGTGA 969 |||||| || ||||| |||||||| || | | ||||||| | | | ||| Sbjct 3147 GGCCCACGCAGGCCCTTGGCTGGTGGACGCGGCCATTGCAGGCG----AGGCGACGGTCG 3092 Query 970 GCGATCTGGGC-CGCATGGAGAC-ATGGGCGCCGGCGGTGTCCTGGCTGATCGCGCAGAC 1027 ||| |||| | ||| | | | ||| |||| || | ||||||||||||| | | Sbjct 3091 CCGAGCTGGCCACGCTCGAACGCGATG--CGCCATCGCTCACCTGGCTGATCGCACCGCA 3034 Query 1028 GGATCTCCCCGGCCTGGCCGAGCTGCTGCGCCAGCAGCTCGACGTTCGCCTGCCTGACGG 1087 || ||| ||||| | | ||||||| | || ||||||||| |||||| || || Sbjct 3033 AGACCTCGAAGGCCTCGGACAACTGCTGCAACTGCGGCTCGACGTGAACCTGCCCGATGG 2974 Query 1088 CCGCACCGCATTGCTTCGTTTCTGGGACCCGCGCGTGTTGGTCAGGTTGGT-CGAAGTGC 1146 ||||| ||| |||||||| ||||| ||||||||||| |||||| |||| || | || Sbjct 2973 CCGCAGCGCCTTGCTTCGCTTCTGAGACCCGCGCGTCCTGGTCAACTTGGCGCGCAC-GC 2915 Query 1147 TGGACGGCGGCCAGCTGCAAGCGTTCTTCGCCCACCTGTACGAATGGCACATGCTGCGCG 1206 | ||||||| |||| ||| |||||||| |||| | | || ||||| |||||| || Sbjct 2914 TCGACGGCGCGCAGCGTGAAGAGTTCTTCGGCCACATTCATGAGTGGCATCTGCTGCACG 2855 Query 1207 ACGGCGAGCGTGTGTGGATCGGGAGAGACCATGCTGACGCTTAACGACGAGCAATGGCAG 1266 | || ||||||| ||||||||||| | |||||||||||| | || | ||| |||||| Sbjct 2854 AAGGGCAGCGTGTTTGGATCGGGAGGCAACATGCTGACGCTCACTGAGGCGCAGTGGCAG 2795 Query 1267 GC---GCTACAGGCCTACGACGCTCGGCACTTCGTCATGGCCGTGCGCGACCAGTTCGTG 1323 | || ||||| ||| || || || ||||| ||||||| |||| |||| || Sbjct 2794 ACCCTGCAACAGG---GCGAAGCCCGCCAGTTCGTGGCGGCCGTGTGCGATGAGTTTCTG 2738 Query 1324 ACCGATCATCCCGCGGNNNNNNNNGAGCCCGGCGGCCAGGTCGTTCTGGATCGCATGCTG 1383 ||| | | || | | |||||||| || ||| || |||| || |||| | Sbjct 2737 ACCAACCGGCCGGAGATGCGCGAGCAGCCCGGCCGCGAGGCGGTGCTGGTGCGAATGCAG 2678 Query 1384 GCGGCCTACGACCACGCCGAACGCCTGGGCTTCACGTCTACGCCGCACGTCGTCTGGTTG 1443 | ||||||||| ||||| | | |||||||| ||||||||| |||| || || Sbjct 2677 GACGCCTACGACTACGCCACCCACGCAGGCTTCACCAGCACGCCGCACATCGTGCGGCTG 2618 Query 1444 CTGTACCTGGCGGCGGATGCCCCG-GCCTGGATCTCGGACCCGGTAGTCGATGCGTTCCT 1502 |||||||| | ||||| || ||| || | || ||||| |||||||| | ||| Sbjct 2617 ATGTACCTGTCTGCGGACGCTCCGCGCATCCAT-GATGACCCTCTAGTCGATCACTACCT 2559 Query 1503 GCGCGAGCGGCCCGGCACGCCCGAGCAGCGCTTGGACGACATGGCCGCCGTCATGCAACG 1562 | || ||| | |||||| || || || | ||||| | | ||||||||| ||| Sbjct 2558 GGGCAAGCCTGGGGCCACGCCGGAACAACGGCTCGACGATCTCGATGCCGTCATGAAACA 2499 Query 1563 CAAATTGGAAGGGGGTCTTTGATGGCGGGTGCAGCCGTCCCACTGATTGAggcagccgca 1622 |||| | | || | || |||||||| ||||| || ||||||||| | | Sbjct 2498 CAAACTCAAGGGAGATCGCTGATGGCGTCACTGGCCGTACCGCTGATTGAGAGCGTGGTC 2439 Query 1623 gcgcgcgccctggcggcactcggcttcggcgcggcggccggcgccaccggcgaggccgc- 1681 | || | | |||| ||||||||| | |||| | |||||||| | || |||||||| Sbjct 2438 GTCCGTGTCTTGGCTGCACTCGGCGTGGGCGTTGTCGCCGGCGCGGCGGGTGAGGCCGCA 2379 Query 1682 ---gcgcgacgcgATCCGCAAACGCAAGGAAGCGGCGGACAAGGCCAAAAGCTCGCCGGT 1738 | || | ||| ||||| ||| |||| | || |||||||| || | | || | Sbjct 2378 AAGGAGC-AGGCG---CGCAAGCGCCAGGAGGAAGCCGACAAGGCGAAGTCCACACCCAT 2323 Query 1739 CGCGCAGACCGACGCACAAACCAAGGCCCAGGCACGGAAGAAGTGCCCGGAGTGCCCGCC 1798 | ||| || || | ||| | | ||| || |||||||| ||| ||||| || Sbjct 2322 CTCGCGCACTGATG------CCACGACGAAGGAGCGCGAGAAGTGCAAGGACTGCCCACC 2269 Query 1799 GGACAAAGG 1807 ||||| || Sbjct 2268 CGACAAGGG 2260 Score = 122 bits (134), Expect = 2e-23 Identities = 173/244 (71%), Gaps = 12/244 (5%) Strand=Plus/Minus Query 2672 TTCAAGGACCGTCCCGGTGTCGGCTGGATGCTGTATCTCCCCCAGGCGATCACCGTGCAG 2731 ||||| ||||| ||||| || ||||||||||| || | || | | ||||| || Sbjct 1407 TTCAAAGACCGCCCCGGCGTGGGCTGGATGCTCTACTTGCCACGAATCCTGACCGTCCAA 1348 Query 2732 CAGGTGCCCGAGGCCGGCGCGCTGATGCCGGTGCTGGG------CGA------CAAGAAA 2779 || ||||| ||||| |||| || |||| | |||| ||| |||| | Sbjct 1347 CAAGTGCCAGAGGCTCGCGCACTCGTGCCCATCATGGGTAAGGACGATAAAGGCAAGGAC 1288 Query 2780 CATCAGGCCGGCACGATCATTGTCAGCGTGACCGACGAGCCGTTTTGCGACCTGAACCCC 2839 | ||| ||||||||||| |||||||| |||||||||||||||| |||| ||| ||| Sbjct 1287 AAGCAGATAGGCACGATCATCGTCAGCGTCACCGACGAGCCGTTTTCCGACGAGAATCCC 1228 Query 2840 GAGCACGTCAGGATCGCCAACAAGATCGAGGTGCGGCTGGCCGACCAGGGGCTGCTGCCG 2899 |||||||||| |||||| ||| ||||| | || ||| ||| || | ||||| || Sbjct 1227 GAGCACGTCAAGATCGCGAACGCCATCGAAATCCGCTTGGTCGATCAAGACCTGCTCCCA 1168 Query 2900 CGCT 2903 |||| Sbjct 1167 CGCT 1164 >seq674120 Length=100 Score = 86.0 bits (94), Expect = 2e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 19639 ACCACGCTGGTTCACCGCGACGGCTACCGCTTCTGGGGCTCGCGCACGTGCAGTGCGGAT 19698 ||||| || ||| |||| |||||| ||||||||||||| ||||| ||||| | || Sbjct 4 ACCACCCTCATTCGCCGCAACGGCTTCCGCTTCTGGGGCAACCGCACCTGCAGCGACGAC 63 Query 19699 CCGCTGTTCGCCTTCGAGAACTACACCCGCACCGC 19733 ||| || || ||||||||||||||||||||||| Sbjct 64 CCGGCATTTGCGTTCGAGAACTACACCCGCACCGC 98 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 121468512229228