Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_009816.1 Length=70579 Score E Sequences producing significant alignments: (Bits) Value seq296729 167 1e-36 >seq296729 Length=6982 Score = 167 bits (184), Expect = 1e-36 Identities = 255/354 (72%), Gaps = 12/354 (3%) Strand=Plus/Plus Query 60080 GTCATAAGGAGAGAATAGGGCCATAGGCTCGCTCTCCTTGGCAAGGCGGAACGTGACATC 60139 ||| || || || || ||| |||| |||| | | || ||||| |||||||| ||| Sbjct 4772 GTCGTATGGCGAAAAAAGGTACATATCCTCGTTGTTTTTTGCAAGCTCGAACGTGATATC 4831 Query 60140 AGGAACGATAACTCCTAGGGAGAGAGTCTTAATACGGATCTTCTCGTCGGCGTTTTCACG 60199 |||| | || || || ||||| |||||||| |||||||||||||| |||||||| || Sbjct 4832 GGGAATAACGACACCGAGTGAGAGTGTCTTAATGCGGATCTTCTCGTCAGCGTTTTCTCG 4891 Query 60200 CTTGGTATCCAGGAA-CGCAAGGATGTCGGGGTGGTGTGCGTTCAAATATACCGCCCCTG 60258 || ||||| ||||| ||| | ||||||||| ||||| || | | ||||||||| || | Sbjct 4892 TTTTGTATCAAGGAATCGC-ATGATGTCGGGATGGTGCGCACTGAGATATACCGCTCCGG 4950 Query 60259 CGCCCTGCCTTGCACCCAGTTGGTTAGAGTAGGAGAAGCTATCTTCTAGAATCTTCATCA 60318 | ||||||| ||| || || || |||| || || ||||| || | |||||| | Sbjct 4951 CACCCTGCCGTGCGCCAAGCTGATTAGCATAACTAAACGCGTCTTCAAGCAGCTTCATGA 5010 Query 60319 CAGGGATGACTCCAGAGGCCTGACCTTCTCGACC--CTTAATCGGAGCTCCTGCCTCGCG 60376 | || || | ||| || | |||| || | | | ||||||||||| || | ||| || Sbjct 5011 CTGGAATAATTCCTGAAGACTGA--TTTTTAATCTGTTTAATCGGAGCACCCGACTCACG 5068 Query 60377 GAGGTTG--GAG-AATCCAATGCCGACTCCGCCACCACGCTTAGACAGCTGGAG 60427 | |||| ||| ||| | || | || || ||||| ||||| |||||||| || Sbjct 5069 AATGTTGCTGAGCAAT--AGTG-CAACACCACCACCGCGCTTTGACAGCTGCAG 5119 Score = 89.7 bits (98), Expect = 2e-13 Identities = 241/363 (66%), Gaps = 12/363 (3%) Strand=Plus/Plus Query 58451 TCGGATGTAGTACAGAGACTTCAGGCCCTTCTTGTGAGCGTAGATCTGCGCTCGGTTAAT 58510 |||||| || || | | ||| | ||| ||||| ||||| |||||||| || || Sbjct 3557 TCGGATATAATAGATCGTCTTGATGCCTTTCTTCCACGCGTATATCTGCGCCTTATTGAT 3616 Query 58511 GTCTCGCGTTGTCGCTGTATCTGGGAAGAACAGCGTGAGAGACATGCCCTGGTCTACCCA 58570 || ||||| ||||| || ||| ||| || || || | || | |||||||| || Sbjct 3617 ATCGCGCGTCGTCGCCGTGTCTTTGAAAAAGAGAGTTAATGAAAGACCCTGGTCGACATG 3676 Query 58571 AGGAGATGCTACAGCGTACATATCAATGA---TCGGGTTAGGTCCGATAGCGTAAGCG-- 58625 | | || |||| || |||| || | || || ||| || |||| || Sbjct 3677 CTGTGTCGCCGCAGCATAGGTATCGATTACTTTCTCGTA---TCCAATTTCGTATGCATC 3733 Query 58626 CTATCAATTGATTCTACATTCTCATTGGTCACTCCGTACTGAGGG-TAATAGACTCGACC 58684 || ||| | || | ||| |||||||||| | ||| || || || || ||||| Sbjct 3734 CTGATAAT--ACTCGAGATTATCATTGGTCA-TGAACGCTGCCGGATAGTACACCCGACC 3790 Query 58685 AAGCTTACCCTCCTTGCGAACCTCAACAGGAGAGGTCACAGGGTGAATCGAGGCCGTGGC 58744 |||| | || || || |||| || | || | | || ||||| || || || | Sbjct 3791 AAGCATTCCTTCTTTTCGAATTTCGATTTTTGATGCGATGGGATGAATAGACGCGGTCGA 3850 Query 58745 ATGGTTAATGTACGAGATAGAGCCGGTTGGTGGGATCGCCTGGAGGTTCTGGTTGTAAAT 58804 ||| ||||||||||| || || ||||| || || | |||||| ||||||||||||||||| Sbjct 3851 ATGATTAATGTACGAAATTGACCCGGTGGGCGGCACCGCCTGCAGGTTCTGGTTGTAAAT 3910 Query 58805 ACC 58807 || Sbjct 3911 TCC 3913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 221162541651380