Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_010116.1 Length=58663 Score E Sequences producing significant alignments: (Bits) Value seq642390 107 7e-19 >seq642390 Length=3645 Score = 107 bits (118), Expect = 7e-19 Identities = 261/386 (68%), Gaps = 16/386 (4%) Strand=Plus/Plus Query 6575 GCCCGGGCGCTTTGGGACGCG-ATCATGCGCGGGACCTGGGATTGGGCGGAGCCGGGCGT 6633 || || ||||| ||||| ||| |||||||| | ||| || | || ||||||||| | Sbjct 1278 GCGCGCGCGCTGTGGGA-GCGCATCATGCGTTCGGCCTACGACTATGCCGAGCCGGGCAT 1336 Query 6634 GCTGTTCATCGACGCGATCAACCGCATGAACAACCTCTGGTACTGCGAGACCATCGCCGC 6693 |||||| | | | |||||| |||||||| ||||||||||||||| | || Sbjct 1337 CCTGTTCCTGGGCCGCATCAACGAGGACAACAACCTGCATTACTGCGAGACCATCACGGC 1396 Query 6694 CACGAACCCCTGCGGTGAGCAACCGCTCCCGCCCTACGGTGCCTGCTTGTTGGGCTCCTT 6753 ||| ||||||||||| ||||| || || || |||| || |||| ||||| || | Sbjct 1397 CACCAACCCCTGCGGCGAGCAGCCCCTGCCTGCCTATGGCTGCTGCGACCTGGGCCCCGT 1456 Query 6754 CAACCTGGTCAAGTACAT---CTACAAGGACGGCGCGGGC--TGCTTC-GCCTTCGACTG 6807 || |||| | | | | | || ||| ||| ||| | || ||||||| Sbjct 1457 CATCCTGCCCCGCTTCGTGCGCCACCCTTTTGGCTTTGGCGGTGCCGCGGCTTTCGACTT 1516 Query 6808 GGA-CCAGTACCGCGAGGACATCCCGCAGGTGGTCCGCGCGATGGACAACGTGGTGGATC 6866 || | | ||| ||| | | || | ||| || ||| ||||||| ||| | || Sbjct 1517 CGAGGCTTTCGCGC-AGGCCGTGGCGTTGCAGGTGCGGGCGCTGGACAATGTGCTCGA-- 1573 Query 6867 GCGCGATCTAT---CCGCTGCCGCAGCAGAAGCAGGAAGCCAAGGACAAGCGCCGCATGG 6923 | || |||| ||||||||||||||| |||| |||| || |||||||||||| | Sbjct 1574 -CCTGACCTATTGGCCGCTGCCGCAGCAGCGCGAGGAGGCCATGGCCAAGCGCCGCATCG 1632 Query 6924 GCCTCGGGATCACCGGCCTGGCCAAC 6949 || | || | |||||||||| |||| Sbjct 1633 GCGTGGGCTTTACCGGCCTGGGCAAC 1658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 183902988725750