Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq649786 98.7 1e-15 seq1631541 96.9 4e-15 seq596412 91.5 2e-13 >seq649786 Length=1608 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 126065 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTC 126124 || ||||| || ||||| | ||||||||| |||| || || ||||| || || || ||| Sbjct 356 CCTTCGTCGCGCGAGATCAATTCATTCGAAAAGCTCAAGCCCGGCATCAGGCCGCGTTTC 415 Query 126125 TTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAAC 126184 |||| ||| || || | ||||| |||||||||||||| || || ||||| || || Sbjct 416 TTCAGCCAAAAGATGGAGCAAAACGAACCCGAGAAGAAAATCCCTTCCACGGCGGCAAAA 475 Query 126185 GCAAAGAGACGCTC 126198 |||| |||||||| Sbjct 476 GCAATCAGACGCTC 489 >seq1631541 Length=403 Score = 96.9 bits (106), Expect = 4e-15 Identities = 220/329 (67%), Gaps = 9/329 (3%) Strand=Plus/Plus Query 114305 CCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAA 114364 |||| ||| || |||||||| | |||||| || ||||| || |||||| || || | Sbjct 3 CCGATGCCGATGGGGCGATGGCGCATATTGGAGTTTCGCGCTTCCTCCACCGGGTAGTAG 62 Query 114365 TTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTT 114424 ||| || || || |||| ||||| || | || || |||||||||| ||| | Sbjct 63 TTCACGTCTATCACTTTATTGAGATTGCGCGTAATCACTTTGGTGATTTCATAAAGGCGT 122 Query 114425 TCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGA 114484 | ||||||||| || | ||| | || | | ||||||| | ||| || || |||| Sbjct 123 TTGTAATCAAACCTTCCT---TCTGCGTTTATAAACTTAGGCAAGGCAATGGAGGCCAAG 179 Query 114485 TTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAAT---TT 114541 || || || | || || | ||| || |||||||||||||| || | || || Sbjct 180 TTGCAAACCGCCACTTCGTCGGGAGAAGTATATTCTATAATTTCCGTGCAAAGATTGCTT 239 Query 114542 GAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAA 114601 || ||| || |||||||| | | ||||| ||| || || || |||||| Sbjct 240 GA---CTTTATCGTGCCCAAATGTTGCTGATTGCTCTTGCGATTGGCGGCGTCTTTGTAA 296 Query 114602 AGCATGTATGGCGTCCCCGTCTCCGTTTG 114630 ||||| || ||||| || || || |||| Sbjct 297 AGCATATACGGCGTTCCTGTTTCTATTTG 325 >seq596412 Length=1263 Score = 91.5 bits (100), Expect = 2e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 113896 ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGT 113955 ||| |||||| | |||| ||| || |||| | ||||| | ||| || || | ||| Sbjct 389 ATGTTTATTGGCCACAATAAAATCGCCCGACAAAGTGCGGCGGGTATAAATGTTCGACGT 330 Query 113956 GTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGG 114015 || || |||||||| || ||||| ||||||||||| | ||| |||||||||||||| || Sbjct 329 ATAAGGTTCAAAGCATTCGTTGTTGCCCAAGATTTGCGAGGTAGAGGCTGTGGGCATCGG 270 Query 114016 TGCCA 114020 |||| Sbjct 269 CGCCA 265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584962044653160