Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_011041.1 Length=137947 Score E Sequences producing significant alignments: (Bits) Value seq657315 111 1e-19 >seq657315 Length=21388 Score = 111 bits (122), Expect = 1e-19 Identities = 217/320 (68%), Gaps = 3/320 (1%) Strand=Plus/Minus Query 134646 CGAATTATTTCTAACCTATCCCTCATTAAGCCCAGCCAAACGGAATGCTCCAGGCTATCA 134705 || || || || | || ||| | ||| || |||| ||| | ||||||||||| | ||| Sbjct 18888 CGGATAATCTCCAGCCGATCGCGCATCAACCCCAACCAGATCGAATGCTCCAGCCCATCG 18829 Query 134706 TCGTAGTGCTCAAAAGCCCTCCCGGTATTGAATGGTGGGTCTATGTAAACACACTTCACT 134765 ||||| ||| ||| || || || || ||| | || ||||| ||| |||| || ||||| Sbjct 18828 TCGTAATGCGTAAAGGCACTGCCAGTGTTGTAAGGCGGGTCAATGAAAACGCATTTCACC 18769 Query 134766 TTGCCTGCATACTCTTGCTCTAGCGCCTTCAATGCTAATAAGTTATCTCCAAAAATCAGT 134825 ||||| | | | || ||| | |||||| | || | | |||||| || || || || Sbjct 18768 TTGCCAGAAAATTCCGCCTCCAACGCCTTGAGCGCCAGCAGGTTATCGCCGAAGATAAGG 18709 Query 134826 TTATTATCAAAAATATCGTTTTCGGTCAC---TTTCTGGCTGTGGTAAGACTTGCTAGAA 134882 ||||||||| ||||| || | || | || | ||| |||||||| | Sbjct 18708 CGATTATCAAAGATATCAGCATCCGAAACCCGGTGCTTGGCGTGATAAGACTTCTCTGTG 18649 Query 134883 TCTTCTAACAAAATGTGCTGCTCTAACTTTTTGCGCTCGTTTTTACCTATCCAGGTAAGT 134942 ||||| | ||||||| || |||| | | || | | ||| || |||||||| ||| Sbjct 18648 TCTTCCAGCAAAATGCGCGGCTCCAGCCGGGGCCGTTTTTCTTTGCCAATCCAGGTGAGT 18589 Query 134943 TCTAATTTGGTTTTACTCAT 134962 || | ||| ||||||||| Sbjct 18588 TCGAGTTTTTGTTTACTCAT 18569 Score = 107 bits (118), Expect = 2e-18 Identities = 148/206 (72%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 133670 CTGGGT--AAGTTTGTAATAGCGGAAGCCACCGCCACCTTGCCAGCTTGCAGACTTAGAA 133727 |||||| |||||||||||||||||| || || || ||||||||| | | | || | Sbjct 19761 CTGGGTGCAAGTTTGTAATAGCGGAAACCGCCACCGCCTTGCCAGTTGGACGCCTGCGTC 19702 Query 133728 ATACCACCTTGATCTTCACCATCAATCACTTTTTGCAAGCGAGGGATAATATGGGTATGA 133787 | || || | |||||||| || || || |||| || || |||||||| ||||| || Sbjct 19701 ACCCCGCCCTTGTCTTCACCGTCGATGACCTTTTTCAGACGCGGGATAATGTGGGTGTGG 19642 Query 133788 CAATGATCACCCAGTTCGATCAAGATCCAACGTCTTTTCATCTTGTGGGCTACAGCAGCA 133847 ||||| || |||| || | || |||||| || | ||| |||||||| || || | Sbjct 19641 CAATGCTCGCCCAACTCAACCATGATCCAGCGGCGGCCCATTTTGTGGGCAACGGCGCCG 19582 Query 133848 GTAGTTCCCGAACCGCCGAATGAATC 133873 || || || || ||| |||| || || Sbjct 19581 GTGGTGCCGGAGCCGGCGAAGGAGTC 19556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432379980068876