Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_011056.1 Length=75811 Score E Sequences producing significant alignments: (Bits) Value seq652898 199 2e-46 seq636339 82.4 4e-11 >seq652898 Length=17576 Score = 199 bits (220), Expect = 2e-46 Identities = 483/726 (67%), Gaps = 19/726 (3%) Strand=Plus/Plus Query 65917 CCACCGGCTCGATAGCTCTGGACGCCGCTCTCGGCATCGGGGGGTATCCGAGGGGCCGGG 65976 ||||||||||| | | |||||| ||| || ||| | ||||| || | ||||||| Sbjct 16678 CCACCGGCTCGCTGGGCCTGGACATCGCGCTGGGCGTGGGGGGCCTGCCCCGTGGCCGGG 16737 Query 65977 TAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCACGCGGTGG 66036 | || || ||||| || || || || || || ||| | ||| || || || | | | | Sbjct 16738 TGGTTGAAATCTATGGCCCGGAATCCTCGGGCAAGACCACGCTGGCGCTGCAGGTGATCG 16797 Query 66037 CCAATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAACATTCTCTCGACC 66096 || | || ||| || |||| | ||||| | |||| || || ||| | || ||| Sbjct 16798 CCGAGATGCAAAAGCAGGGCGGCACCTGCGCCTTCGTCGATGCGGAGCATGCGCTGGACG 16857 Query 66097 CTGAGTACGCCGCGGCGCTCGGGGTGGA--TGTCGACAATCTCGTGGTTGTGCAGCCAGA 66154 | ||||| ||||| ||| | |||| | | || || | ||||| || Sbjct 16858 TGCAATACGCGCAAAAACTCGGCGTGCAACTGTC--CGACCTGCTGATCAGCCAGCCCGA 16915 Query 66155 CACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAGGTTTCCAT 66214 ||| ||||| || || ||||||||||| ||| || || || |||| ||| | | Sbjct 16916 CACCGGCGAACAAGCGCTGGAGATCGTCGACAGCCTGGTGCGCTCCGGCGCGGTCGACCT 16975 Query 66215 CATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGACATCGG 66274 ||||| |||||||| ||||| |||||| ||| ||| || ||||||| ||||| || Sbjct 16976 GATCGTGGTGGACTCGGTGGCCGCCCTGACGCCCAAGGCCGAAATCGAAGGCGACATGGG 17035 Query 66275 GGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAGCTGACCGG 66334 ||| | | |||||||| || || |||||| ||||| |||||||||| |||| Sbjct 17036 CGACGCCCTGCCGGGCCTGCAAGCGCGGCTGATGAGCCAGGCATTGCGCAAGCTCACCGC 17095 Query 66335 CACGATTGCCAGCACCAACACGCTCACCCTGTGGGTGAATCAGCTGCGCGAGAAGATCGG 66394 ||||| | |||||| | | | | | || ||| | ||| ||||||||| Sbjct 17096 GACGATCAAGAAGACCAACTGCATGGTCGTCTTCATCAACCAGATCCGCATGAAGATCGG 17155 Query 66395 CAACGTGGGCTACGG----CCCGAATGAGACCACCACCGGTGGTAAGGCTCTGCGCTTCT 66450 |||| | ||| |||||| ||||||||||| || || || || |||| Sbjct 17156 ---CGTGATGTTCGGCAGCCCCGAA----ACCACCACCGGCGGCAATGCGCTCAAGTTCT 17208 Query 66451 ACGCCTCGGTGCGTATGGATGTCCGCAGGATCGCCACCGAGAAGGAAGGCGATGAGGCTG 66510 ||||||||||||| |||| ||||| | | || |||| ||| | |||||||| || Sbjct 17209 ACGCCTCGGTGCGCCTGGACATCCGCCGCACCGGCACCATCAAGAAGGGCGATGAAGCCA 17268 Query 66511 TCGGCAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGCGCCTCCG--CACCGCCA 66568 | |||||| || || ||||| ||||||||||| | || ||| || || Sbjct 17269 TTGGCAACGAAACCAAGGTCAAGGTGGTCAAGAACAAAGTCAGCCCGCCGTTCAAGACC- 17327 Query 66569 GGCTGAGTTTTCCATCGTCTACGGCGAGGGCATTTCCCGCGAGGCTGAACTCCTCGACAT 66628 || ||||| |||| | | ||||| ||||| |||||||| ||| || ||||||| Sbjct 17328 -GCCGAGTTCGACATCCTGTTTGGCGAAGGCATCAGCCGCGAGGGCGAAATCATCGACAT 17386 Query 66629 GGCCGT 66634 || ||| Sbjct 17387 GGGCGT 17392 >seq636339 Length=1141 Score = 82.4 bits (90), Expect = 4e-11 Identities = 273/425 (64%), Gaps = 0/425 (0%) Strand=Plus/Minus Query 65911 CCATTCCCACCGGCTCGATAGCTCTGGACGCCGCTCTCGGCATCGGGGGGTATCCGAGGG 65970 ||||| ||||||| ||| | | || || || || |||||||| || ||| | | Sbjct 827 CCATTTCCACCGGTTCGTTGGGGCTTGATTTGGCGCTGGGCATCGGCGGCATTCCCCGCG 768 Query 65971 GCCGGGTAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCACG 66030 | || || |||||| ||||| || ||||| || || || | ||| | | ||| Sbjct 767 GACGCGTGACGGAGATTTACGGGCCGGAGTCATCGGGAAAAACCACGCTCACGATGCACT 708 Query 66031 CGGTGGCCAATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAACATTCTC 66090 | ||| | ||||| || || || || |||| |||||||||||||||| | Sbjct 707 GTATTGCCGAAGCCCAAAAAAAAGGGGGGCTGGCGGCCTTCATCGACGCCGAACATGCCT 648 Query 66091 TCGACCCTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTTGTGCAGC 66150 | ||| ||| |||| | || | || || || || | | || | Sbjct 647 TTGACAAAACGTATGCCGAAAAATTGGGCATTGACACGGAAAACCTTCTCATCTCTCAAC 588 Query 66151 CAGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAGGTTT 66210 | |||| || |||||||| || || || | || | | | || || || | | | Sbjct 587 CCGACAACGGAGAGCAGGCGCTTGAAATTGCCGAGCATTTAATCCGCTCCGGGGCGATAG 528 Query 66211 CCATCATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGACA 66270 ||| || || | ||||| ||||| ||||||||||| ||||||| | ||||| || | Sbjct 527 ACATTATAGTGATTGACTCGGTGGCCGCCCTGGTGCCCAAGGCGGAGTTGGAAGGCGAGA 468 Query 66271 TCGGGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAGCTGA 66330 | ||||| | | || |||| || ||||| ||||| ||||| |||||||||| | Sbjct 467 TGGGGGAAAGCAAAATGGGGTTGCAGGCGCGCCTCATGTCGCAGGCGTTGCGCAAGCTCA 408 Query 66331 CCGGC 66335 ||||| Sbjct 407 CCGGC 403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 237566318486084