Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq644427 86.0 6e-12 >seq644427 Length=940 Score = 86.0 bits (94), Expect = 6e-12 Identities = 262/405 (65%), Gaps = 0/405 (0%) Strand=Plus/Minus Query 93906 GTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAGGC 93965 |||||| ||||| || || ||| || | || || ||||| | |||| |||| Sbjct 406 GTTCAATGCGGGCACGCCCAAGCCGCAACTTTCAAGCTGCTTCCTCCTCACGATGAAGGA 347 Query 93966 CGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACGC 94025 |||| |||| ||| |||| |||| | | || | || | || || ||| || Sbjct 346 CGACAGCATCGACGGCATTTATGACACCTTAAAACAAACCGCCAAAATTTCCCAATCGGC 287 Query 94026 GGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTAC 94085 ||| || |||| | || | ||| |||| || |||| || |||||||| || || Sbjct 286 GGGCGGCGTCGGCTTGAGCATTCACAACGTGCGCGCCAAAGGCTCCTACATAAAGGGAAC 227 Query 94086 CAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTA 94145 |||||||| |||||| || |||| |||||||| || ||| |||| ||||| Sbjct 226 GGGCGGCACCTCTAACGGCATCATCCCCATGCTCCGCAATTTTGACATGACGGCACGCTA 167 Query 94146 CGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCA 94205 || ||||| || || || | | || || ||| || | ||||| || |||||||| Sbjct 166 TGTAGACCAAGGCGGCGGAAAACGCAAAGGAAGTTTTGCCATTTATCTAGAACCCTGGCA 107 Query 94206 CGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGGC 94265 ||| || | | ||| | || | || || |||||||| || | |||| Sbjct 106 CGCCGATATTTTTGATTTTTTGGAGTTAAAGAAAAATCACGGCAAGGAAGAAATGCGGGC 47 Query 94266 CAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAA 94310 | || || || || || || ||| | || ||||| |||||||| Sbjct 46 ACGCGATCTTTTTTATGCGCTTTGGATTCCCGACCTATTTATGAA 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 484460618650920