Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_011273.1 Length=164602 Score E Sequences producing significant alignments: (Bits) Value seq296729 412 4e-110 seq74876 109 6e-19 >seq296729 Length=6982 Score = 412 bits (456), Expect = 4e-110 Identities = 662/946 (70%), Gaps = 10/946 (1%) Strand=Plus/Minus Query 155933 GCGCCATCAACTGGAACCGCGTGATCGACGAGAAGGACGCGGAGGTGTGGAACCGGCTGA 155992 |||| ||||||||||| || | || || || ||| |||||||||||||| || Sbjct 3401 GCGCGATCAACTGGAATCGAATCCAGGATGATAAAGACCTTGAGGTGTGGAACCGTCTCG 3342 Query 155993 CCAACAACTTCTGGCTGCCGGAGAAGATCCCGGTGTCCAATGACGTCCAGTCGTGGCACC 156052 |||||| ||| |||| || || | || | || || ||||| || |||||| || Sbjct 3341 TTGGCAACTTTTGGTTGCCCGAAAAAGTACCCCTCTCTAACGACGTGCAATCGTGGAACA 3282 Query 156053 AGCTGACCGAGGAAGAGCGCCTGATCACCATGCGGGTGTTCACCGGCCTGACGATGCTGG 156112 |||| | |||| | || |||| |||||||| |||||||| ||||| |||| | Sbjct 3281 CACTGAGCTCTCAAGAACAGATGCTCACGATGCGGGTATTCACCGGGCTGACATTGCTCG 3222 Query 156113 ACACCATCCAGGGCACCGTCGGCGCGGTCTCGCTCATCCCGGACGCCATCACCCCGCACG 156172 | ||||| || || || || || |||||||| |||||||| || || | || ||||||| Sbjct 3221 ATACCATTCAAGGAACGGTGGGGGCGGTCTCACTCATCCCCGATGCTCTTACGCCGCACG 3162 Query 156173 AGGAGGCGGTGTACACCAACATCGCGTTCATGGAGAGCGTGCACGCACGCAGCTACTCGA 156232 | || |||||||| || ||||| | || ||||| || |||||| || ||||| Sbjct 3161 AAGAAGCGGTGTATACAAACATTTCTTTTATGGAATCGGTTCACGCAAAGAGTTACTCCT 3102 Query 156233 ACATCTTCTCGACGCTGTGCTCCACCAAGGAGATCGACGCCGCGTTCCGCTGGTCGGAGG 156292 ||||| ||||| ||||| ||||| || || |||| || ||||| ||||||| || Sbjct 3101 CGATCTTTTCGACCCTGTGTTCCACACGCGAAATTGACGATGCCTTCCGATGGTCGGTGG 3042 Query 156293 AGAACGCCAACCTGCAGAAGAAGGCTGAGATCGTGCTCAGCTACTACAACGGTGACGACC 156352 | |||| ||| |||| || || ||| ||||| | |||||| || || || | Sbjct 3041 AAAACGAAAACTTGCAAAAAAAAGCTTCCATCGTCATGGAGTACTACCGAGGGGATGAGC 2982 Query 156353 CGCTCAAGCGCAAGGTCGCCTCCACGCTGCTGGAGGGCTTCCTGTTCTACAGCGGCTTCT 156412 | ||||| || ||||| ||||| ||| |||| ||| ||||| |||||| || || | Sbjct 2981 CACTCAAACGTAAGGTTGCCTCAACGTTGCTTGAGTCATTCCTCTTCTACTCAGGATTTT 2922 Query 156413 ACCTGCCGATGTTCTGGTCGTCGCGAGGCAAGCTCACCAACACCGCCGACATGATCCGGC 156472 |||| ||||||| |||||| || | || ||||||||||||||||| | || || | Sbjct 2921 ACCTCCCGATGTATTGGTCGAGCCGCGCAAAACTCACCAACACCGCCGATCTTATTCGAC 2862 Query 156473 TCATCATCCGGGACGAGGCCGTGCACGGCTACTACATCGGCTACAAGTTCCAGAAGGGCC 156532 ||||||| ||||| || || |||||||| ||||||||||||||||||| |||| || Sbjct 2861 TCATCATTCGGGATGAAGCTGTGCACGGTTACTACATCGGCTACAAGTACCAGCGTGGTT 2802 Query 156533 TGGAGAAGGAGACCAAGGCCCGCCAGC---AGGAACTCAAGGACTACACCTATGAGCTGC 156589 |||| | || | | ||| ||| | || ||||| || ||||| | | || | Sbjct 2801 TGGAAATGGTG---GATGCCGCGAAGCGTGAAGAGCTCAAAGATTACACTTTTTCACTCC 2745 Query 156590 TGTTCGAGCTGTTCGACAACGAGCAGGAGTACACCCAGGACCTCTACGACGCCACCGGCC 156649 | | ||| || | ||| || || | | || || ||||| || || |||| ||| | Sbjct 2744 TCTACGAACTCTACGAGAATGAAGTGCAATATACACAGGATCTTTATGACGAAGTCGGAC 2685 Query 156650 AGACCGAGGACGTGAAGAAGTTCCTGCGGTACAACGGCAACAAGGCCCTGCAGAACCTGG 156709 ||||| ||||| ||||| || ||| ||||| | |||||| || || |||||||| Sbjct 2684 TTACCGAAGACGTCAAGAAATTTTTGCACTACAATGCCAACAAAGCGCTCATGAACCTGG 2625 Query 156710 GCTACGACGCGCTGTTCAGCCGCAG-CGACT-GCGACGTCAACCCGGCCATCCTGAGCGC 156767 | || || ||| ||||| ||| || || | ||| || | ||| || || || || Sbjct 2624 GATATGAGGCGATGTTC--CCGAAGTCGGTTACCGATGTAAGCCCAGCGATTCTCTCGGC 2567 Query 156768 GCTGTCGCCCGGTGGAGACGAGAACCACGACTTCTTCTCGGGGTCGGGCAGCACGTACGT 156827 |||| ||| | ||||||||||| ||||||||||| || || ||| | || || Sbjct 2566 CTTGTCTCCCAACGCCGACGAGAACCATGACTTCTTCTCTGGTTCCGGCTCTAGCTATGT 2507 Query 156828 CATGGCCAAGGGTGTGGTCACCGAAGACGACGACTGGGACTTCTGA 156873 || | |||| || || || || |||||||||||||||||| Sbjct 2506 GATCGGTAAGGCGGTCAATACTGAGGATGACGACTGGGACTTCTGA 2461 >seq74876 Length=3105 Score = 109 bits (120), Expect = 6e-19 Identities = 120/160 (75%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 152882 AGTCATCTTCGAGAGATTCACCGACCGCGCCCGTCGCGTCTGCGTCCTCGCCCAAGAGGA 152941 || ||| || |||||||| |||||||| || ||||| || ||| || || ||||| || Sbjct 340 AGCCATGTTTGAGAGATTTACCGACCGAGCTCGTCGGGTGGTCGTGCTTGCGCAAGAAGA 281 Query 152942 AGCGCGCATGCTCAACCATGCGTACATCGGCACCGAGCATCTGCTGCTCGGGCTGGTCCA 153001 ||| ||||||| || |||||||||||||| || | ||||| || || |||| Sbjct 280 AGCTAAGTTGCTCAAACACAACTACATCGGCACCGAACACATCCTGCTGGGCCTCATCCA 221 Query 153002 CGAGGGCGAGGGCGTAGCCGCCAAGGCGCTGCAGGCGCTC 153041 |||||| ||||| || || |||| |||||| || ||||| Sbjct 220 CGAGGGTGAGGGTGTCGCGGCCAGAGCGCTGGAGTCGCTC 181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515674596713040