Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq649786 82.4 7e-11 >seq649786 Length=1608 Score = 82.4 bits (90), Expect = 7e-11 Identities = 164/235 (70%), Gaps = 10/235 (4%) Strand=Plus/Minus Query 52609 TCAAGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGC 52668 |||| || || || | || |||||||||||| | || | |||| || || ||| | Sbjct 275 TCAAAGACGCCGTAGTAATTGAAAAGGAGTTTGTGACCGATTCGCTTCCCGT-GAGTTTA 217 Query 52669 -TGGGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTG 52727 | || ||||| || || ||||| | || || ||||||||||| || ||| || || Sbjct 216 ATCGGGATGAATGCCGCTTCGATGTGTCAATATATAGAGTTTGTGGCAGACCGTTTGCTG 157 Query 52728 GTGCAGCT---CGGGCAGCCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAAC 52784 ||| || | ||| || ||||| | || || |||||| || || |||||| || Sbjct 156 GTGGAGTTAACCGGACA--AAAAGT-TTATAATGCCGTCAATCCTTTCGACTTTATGGAC 100 Query 52785 AACATTTCGCTTG-AGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTAT 52838 | ||||| |||| |||| || || || || || |||||||| || ||||| ||| Sbjct 99 ATGATTTC-CTTGCAGGGAAAAACTAATTTCTTTGAGAAGCGGGTGGGCGAATAT 46 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 485967889351440