Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1631541 113 4e-20 seq649786 96.9 3e-15 >seq1631541 Length=403 Score = 113 bits (124), Expect = 4e-20 Identities = 130/173 (75%), Gaps = 4/173 (2%) Strand=Plus/Minus Query 123588 ATTATCGAAACACAAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAAC 123647 ||| | ||| | ||| | ||||| ||||||||||| ||||| |||||||||||| ||| Sbjct 337 ATTTTGGAAGCGCAAATAGAAACAGGAACGCCGTATATGCTTTACAAAGACGCCGCCAAT 278 Query 123648 AGGAAAACCAATCAGAGCAAC--TTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAA 123705 | || | ||||| |||||| ||||| || ||||| | || ||||||||| | |||| Sbjct 277 CGCAAGAGCAATC--AGCAACATTTGGGCACGATAAAGTCAAGCAATCTTTGCACGGAAA 220 Query 123706 TTATCGAATACAGCGATGCCGATCAAGTGGCCGTGTGTAATTTGGCTTCGATT 123758 |||| ||||| | | |||| ||||||| || || || ||||| || ||| Sbjct 219 TTATAGAATATACTTCTCCCGACGAAGTGGCGGTTTGCAACTTGGCCTCCATT 167 >seq649786 Length=1608 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/226 (71%), Gaps = 4/226 (2%) Strand=Plus/Plus Query 138087 TATTCTCCTACGCGCCGCTCaaaaaaaTTAGTTTTACCCTCCATGGATATGTTAGTCATA 138146 ||||| || || ||| |||||| ||||||||||| |||| || ||| || | |||| Sbjct 47 TATTCGCCCACCCGCTTCTCAAAGAAATTAGTTTTTCCCTGCAAGGAAATCATGTCCATA 106 Query 138147 AAATTAAAAGGATTACTCGCCATA-AAATGCTTTGGCTGATTAAGATCGACAAGCAAACG 138205 || | |||||||| || || ||| |||| | | |||| || || |||||||| Sbjct 107 AAGTCGAAAGGATTGACGGCATTATAAACTTTTTGTCCGGTTAAC-TCCACCAGCAAACG 165 Query 138206 ATCGGCTACAAATTCAATGTATCGACACATCGATTCGGTGTTCATGCCCAACAAACTGCA 138265 || || ||||| || || ||| |||||||||| ||| ||||| || | ||||| || Sbjct 166 GTCTGCCACAAACTCTATATATTGACACATCGAAGCGGCATTCATCCCGATTAAACT-CA 224 Query 138266 AGGCAA-CGCCGTTTTAAAAAATTCCTTTTCAATTTCTACCGCTTC 138310 || || || | | ||| |||||||||||| |||| || || Sbjct 225 CGGGAAGCGAATCGGTCACAAACTCCTTTTCAATTACTACGGCGTC 270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 442626806068920