Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_013055.1 Length=39896 Score E Sequences producing significant alignments: (Bits) Value seq515650 197 3e-46 >seq515650 Length=11028 Score = 197 bits (218), Expect = 3e-46 Identities = 469/699 (67%), Gaps = 11/699 (2%) Strand=Plus/Plus Query 8458 CGGCCGTCGATGGGAAAGACCTCCCTCGCAATGAATATCGCAGAGCATGTCGCCATCGTG 8517 || ||||||||||| |||||||| || || |||| || || |||||||| || ||| Sbjct 8424 CGCCCGTCGATGGGCAAGACCTCGCTGGCGGTGAACATTGCCGAGCATGTGGCGCTCGAT 8483 Query 8518 TCGAGATTGCCCGTCGGCGTCTTGTCGCTGGAAATGCCGACCGAACAGTTGACCATGCGC 8577 | | |||| || | | |||| || |||||||| ||| || || | ||||| Sbjct 8484 GAGGGCCTGCCGGTGGCCATCTTCTCTATGGAAATGGGCGCCGCGCAACTGGCGGTGCGC 8543 Query 8578 ATGCTGGCGTCGACATCCCGTATCAGCCAAAACAGGCTGCGAACCGGTCGCCTCGAGGAT 8637 || ||| |||| ||| | | ||| || ||||| ||||| || ||| ||| Sbjct 8544 ATCGTGGGCTCGATTGGCCGCGTGAACCAGGGCAACCTGCGCACCGGCCGGCTCAGCGAT 8603 Query 8638 GACGACTGGCCGCGCCTGACGCGTGGCGTCGAGCTGATGGCCGACGCGCCCGTGCATATT 8697 || || ||||| |||||||| | | | || | || | | | | |||| || Sbjct 8604 GAGGAGTGGCCACGCCTGACCGAAGCCATTGAAAAGCTGCGCACGGTGTCGCTGCACATC 8663 Query 8698 CTCGATAGCTCCGCGATCAC-CCCGTCGAAATTCAAGTCCGAGTTGCGGCGCTTGTATCG 8756 ||| | | | | | || ||| |||| | | | || | ||||| || || Sbjct 8664 GACGAAACCCCGGGCCTGACGCCCAGCGAACTGCGCG-CCAATGCCCGGCGTCTGGCGCG 8722 Query 8757 CGAATGCGGCCGGCTCGGGATGATTGTCGTTGACTACCTGCAGCTGATGT-CGGGT--GA 8813 | | |||||| |||||| |||| || || ||||| ||||| ||||| ||| | || Sbjct 8723 CCAGTGCGGCAAGCTCGGCCTGATCGTGGTGGACTATTTGCAGTTGATGAGCGGCTCGGA 8782 Query 8814 CGGCGGCGGATCTGAAATGCGGGCCACCGAGGTCGCCGAAATATCGCGCGCACTCAAACA 8873 || || || || | ||||||||||| | | ||| || ||||||| || ||| Sbjct 8783 CGCATCAGGCTCGGACAACCGGGCCACCGAACTGGGCGAGATCTCGCGCGGCCTGAAAAT 8842 Query 8874 AATTGCGAAGGAACTCGACGTTCCGATCATCGCGCTGTCGCAGCTTAATCGAGGGCTCGA 8933 | || |||||||| | ||| | || ||||| |||||||| ||||| | |||| Sbjct 8843 GCTGGCCAAGGAACTGCAATGCCCGGTGATGGCGCTCTCGCAGCTCAATCGCTCGGTCGA 8902 Query 8934 GAATCGCCCAAACAAGCGGCCCGTCATGTCCGATCTGCGCGAGTCGGGTGCGATCGAGCA 8993 | | ||| | |||| || || | |||||||| ||||||||||| || || |||||||| Sbjct 8903 GCAGCGCACCGACAAACGCCCGCTGATGTCCGACCTGCGCGAGTCCGGCGCCATCGAGCA 8962 Query 8994 GGATGCCGACGTGATCCTCTTTATCTACCGCGATGAGGTCTATAACCCCGACAGCGCAGA 9053 ||||||||| | ||| | || ||||||||||| || ||| ||| || ||| || Sbjct 8963 AGATGCCGACATCATCATGTTCATCTACCGCGACGACTACTACAACAAAGAGAGCAAGGA 9022 Query 9054 TCGCGGTAC--GGCCGAAATCATCATTGCGAAGCAGCGAAACGGGCCGATTGGCACCGTA 9111 || | || ||||||||||||||| | |||||||| || || |||| ||||| || Sbjct 9023 --GCCGAACGTGGCCGAAATCATCATCGGCAAGCAGCGCAATGGCCCGACCGGCACGGTC 9080 Query 9112 CGGCTCGCATTCCAGAACGCAACA-ACCCGGTTCGAGAA 9149 ||| |||||||| | | || || || |||||||| Sbjct 9081 AAGCTGTTCTTCCAGAA-GAACCAGACGCGCTTCGAGAA 9118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 125032073767692