Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq1631541 96.9 4e-15 seq596412 89.7 6e-13 >seq1631541 Length=403 Score = 96.9 bits (106), Expect = 4e-15 Identities = 220/329 (67%), Gaps = 9/329 (3%) Strand=Plus/Plus Query 116266 CCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAA 116325 |||| ||| || |||||||| | |||||| || ||||| || |||||| || || | Sbjct 3 CCGATGCCGATGGGGCGATGGCGCATATTGGAGTTTCGCGCTTCCTCCACCGGGTAGTAG 62 Query 116326 TTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTT 116385 ||| || || || |||| ||||| || | || || |||||||||| ||| | Sbjct 63 TTCACGTCTATCACTTTATTGAGATTGCGCGTAATCACTTTGGTGATTTCATAAAGGCGT 122 Query 116386 TCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGA 116445 | ||||||||| || | ||| | || | | ||||||| | ||| || || |||| Sbjct 123 TTGTAATCAAACCTTCCT---TCTGCGTTTATAAACTTAGGCAAGGCAATGGAGGCCAAG 179 Query 116446 TTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAAT---TT 116502 || || || | || || | ||| || |||||||||||||| || | || || Sbjct 180 TTGCAAACCGCCACTTCGTCGGGAGAAGTATATTCTATAATTTCCGTGCAAAGATTGCTT 239 Query 116503 GAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAG 116562 || ||| || |||||||| | | ||||| ||| || || || ||||| Sbjct 240 GA---CTTTATCGTGCCCAAATGTTGCTGATTGCTCTTGCGATTGGCGGCGTCTTTGTAA 296 Query 116563 AGCATATATGGCGTCCCCGTCTCCGTTTG 116591 |||||||| ||||| || || || |||| Sbjct 297 AGCATATACGGCGTTCCTGTTTCTATTTG 325 >seq596412 Length=1263 Score = 89.7 bits (98), Expect = 6e-13 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 115858 TGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTG 115917 || |||||| | |||| ||| || |||| | ||||| | ||| ||||| | ||| Sbjct 388 TGTTTATTGGCCACAATAAAATCGCCCGACAAAGTGCGGCGGGTATAAATGTTCGACGTA 329 Query 115918 TATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGT 115977 || || |||||||| || ||||| ||||||||||| | || |||||||||||||| || Sbjct 328 TAAGGTTCAAAGCATTCGTTGTTGCCCAAGATTTGCGAGGTAGAGGCTGTGGGCATCGGC 269 Query 115978 GCCA 115981 |||| Sbjct 268 GCCA 265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 600780552961320