Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq596412 98.7 2e-15 seq418291 98.7 2e-15 >seq596412 Length=1263 Score = 98.7 bits (108), Expect = 2e-15 Identities = 171/246 (70%), Gaps = 2/246 (1%) Strand=Plus/Minus Query 203840 TTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCG 203899 || |||| |||||||| ||||||| | || | || | || ||| |||||||| Sbjct 730 TTATCCAGCGTGAACTTGATGGCGTCGGCCGCCGCTTTGGAGCGCAAATAATACATGCCT 671 Query 203900 GTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGG 203959 || || | || |||| |||| | || | ||||| |||| ||||| | | | || Sbjct 670 GTTTTCAATCCTTTCTTCCACGCATAAAAATGCATCGAAGTAAGTTTTCCAAAACTTGGC 611 Query 203960 TCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGC 204018 || | || ||||| || || || |||| ||||| | |||| || ||||| | Sbjct 610 TCCGTGATATGAATATTGAGGCTTTGCGATTGGCAAATGAACG-CGCCGCGGTCTGCCGA 552 Query 204019 CATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGTG 204078 ||| | ||| ||||||||||||||||||||||||||||| || | | |||| | |||| Sbjct 551 CATGTCGATGATGGTCTTCTGCGAAATCTCCCACACCGTTTTATAAAGGTCTTTAATGTG 492 Query 204079 TTGAGG 204084 ||| || Sbjct 491 TTGCGG 486 >seq418291 Length=2843 Score = 98.7 bits (108), Expect = 2e-15 Identities = 87/109 (80%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 203953 GTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATC 204012 ||| || || || ||||||||||| || ||||| || ||||| ||||| || | ||||| Sbjct 1741 GTTTGGTTCTGCAATGTGAATGTTGAGGGACTGACTCTGGTCAATGAACGGACCACGATC 1800 Query 204013 TGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061 || ||||| |||||||| |||||||| || |||||||| || || ||| Sbjct 1801 AGCAGCCATCTTGATAATAGTCTTCTGGGAGATCTCCCAGACGGTTTTG 1849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 778660430955120