Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq649786 253 2e-62 >seq649786 Length=1608 Score = 253 bits (280), Expect = 2e-62 Identities = 525/779 (67%), Gaps = 27/779 (3%) Strand=Plus/Plus Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663 |||||||||||||||||| |||||||| |||||||||||||||| ||||||||| | Sbjct 41 TTTTGATATTCGCCCACCCGCTTCTCAAAGAAATTAGTTTTTCCCTGCAAGGAAATCATG 100 Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTG-CCGATCAGGTCGACGAG 132722 |||||| || || || ||| | | || || ||| || ||| | | || || || Sbjct 101 TCCATAAAGTCGAAAGGATTGACGGCATTATAAA-CTTTTTGTCCGGTTAACTCCACCAG 159 Query 132723 CAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAG 132782 || | ||| ||||| ||||| || ||||| |||| | || ||| | || | | Sbjct 160 CAAACGGTCTGCCACAAACTCTATATATTGACACATCGAAGCGGCATTCATCCCGATTAA 219 Query 132783 ACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGAT 132842 || ||| || |||| ||||| | ||| | || || | || ||||| ||| || Sbjct 220 ACTCACGGGAAGCGAATCGGTCACAAACTCCTTTTCAATTACTACGGCGTCTTTGATAAT 279 Query 132843 TTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTT-GAACATCAAG--CAAGC 132899 ||| | || ||| | | | | || | || || || | | || || || || Sbjct 280 TTCAATCACCCGCTCTTTTGGCAACGGCTGAATCACGTGTTTAGTATATAAATGACAGGC 339 Query 132900 AAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAG-TCAAGCCGG 132958 ||| |||||||||||||| ||||| | || || | ||| || | |||| ||||||| | Sbjct 340 AAAATCGCAATGCAAGCCTTCGTCGCGCGAGATCAATTCATT-CGAAAAGCTCAAGCCCG 398 Query 132959 GCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTG-CCCGAAAAGAAGACG 133017 |||| ||||||||||| || |||||||| |||| | | |||| ||||| ||||| | Sbjct 399 GCATCAGGCCGCGTTTCTTCAGCCAAAAGATGGAG-CAAAACGAACCCGAGAAGAAAATC 457 Query 133018 CCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTG--CTGGCGA 133075 || || ||||| || ||||| | ||| ||||| ||| Sbjct 458 CCTTCCACGGCGGCAAAAGCAATCAGACGCTC----------------TTGANNNNNNNN 501 Query 133076 TCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCA 133135 | |||||| ||||| || | ||| ||||| ||||||||| ||||||| | Sbjct 502 NNNNNNNNAACGCCCAATCGGCTTTCTTTTTCACGCATTCCATCGTTTCAATGGCGTGAA 561 Query 133136 ACAAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTT 133195 || |||| |||||| | || | ||||||||| || ||||| |||||| ||| Sbjct 562 GCAGACGGTCTTTCTCCTGCGCGTCTTTCACGTAGGTATCAATGAGCAGCGAATAGGTTT 621 Query 133196 CCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCT 133255 | ||||| | || || | ||| ||||| |||||||| || | || || | Sbjct 622 CGGAGTGGATATTTTCAACGGCAATTTGGAAGCCGTAGAAAAATTTAGCTTCCGTATATT 681 Query 133256 GCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGA 133315 ||||||| | ||| | || ||||||||||||| || || |||||||||||||| | Sbjct 682 GCACTTCCGACACAAAATGTTCCGCCAGATTTTCGTTTACAATTCCGTCGCTGGCGGCAA 741 Query 133316 AAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTCG 133374 |||| |||| |||||| |||| ||||| ||||| | || ||| |||| | ||| ||| Sbjct 742 AAAACGCCAAAACGTGCGTGATAAAATGTCGCTCATCGTGGTTTAAGCCTTGCCAATCG 800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 489797171671680