Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq647165 105 5e-17 seq85824 93.3 3e-13 >seq647165 Length=2149 Score = 105 bits (116), Expect = 5e-17 Identities = 173/245 (71%), Gaps = 12/245 (5%) Strand=Plus/Plus Query 518441 TTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAA---A 518497 |||||| ||| ||| |||||| |||| || ||||| ||||| || ||| | | Sbjct 184 TTAATACCTTGAAA-GGCCAGAATTTAATGTCTGACTGAAC----TGAAGATTCATCCCA 238 Query 518498 TCTCT-ACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTG 518556 || | |||||| || || ||| ||||||| ||||| ||||| | | || Sbjct 239 TCGCCGACCAATCAAACGCTTTATGTCAAAAACCGTATTTTCCGGATTCGAGGTAAGCTG 298 Query 518557 ATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTG---TAAATGAAACATATGATGG 518613 | ||||| ||||||||||||||| ||||| ||||| | || | ||| ||||| || Sbjct 299 GTTCTTGGCAGCATCTCCAATCAGACGTTCTCCCTCTGGTGTGAAGGCAACGTATGACGG 358 Query 518614 AGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACC 518673 || ||||||| ||||||||||| ||||| || || || |||||||| ||||||| Sbjct 359 TGTAATGCGATTGCCTTGATCATTGGCAATTATCTCGACACGACCATTTTTGTATACACC 418 Query 518674 TACAC 518678 |||| Sbjct 419 AACAC 423 >seq85824 Length=5709 Score = 93.3 bits (102), Expect = 3e-13 Identities = 131/184 (71%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 518201 GGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCT 518260 || |||||||| || | || || || || || ||||| || ||||||||||| || Sbjct 1309 GGCTCATTAATGATGCGCATGACGTTTAGGCCTGCAATGACGCCAGCATCTTTAGTTGCC 1250 Query 518261 TGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTA 518320 ||||| || | |||||| || ||||| |||||||| | ||| |||| || || | ||| Sbjct 1249 TGTCTCTGAGCATCGTTGAAGTATGCTGGAACAGTTACAACAGCATGTGTCACCTTTTTG 1190 Query 518321 CCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCT 518380 |||| ||||| ||| || | |||||||| | | | ||| | ||| || | ||| Sbjct 1189 CCAAGGTAAGCCTCTGCAGTCTCCTTCATTTTGATGAGCACCATGGCTGAGATCTCCTCT 1130 Query 518381 GGGG 518384 |||| Sbjct 1129 GGGG 1126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3698471203778062