Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1050894 89.7 6e-13 seq596412 86.0 7e-12 >seq1050894 Length=114 Score = 89.7 bits (98), Expect = 6e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 116985 ATAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCAT 117044 ||| || || |||||||||||||||||||| |||||||| |||||| ||| ||||||| Sbjct 6 ATATTCGCCCACTCGCTTCTCAAAGAAGTTCGTCTTCCCTTCAAGGGAGATGCTTTCCAT 65 Query 117045 AAAGTCAAATGGATTCT 117061 |||||||| ||||||| Sbjct 66 GAAGTCAAACGGATTCT 82 >seq596412 Length=1263 Score = 86.0 bits (94), Expect = 7e-12 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 105934 ATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 105993 ||| ||||||| ||| || |||||||||||||| || || ||||||||||| | ||| || Sbjct 344 ATAAATGTTCGACGTATAAGGTTCAAAGCATTCGTTGTTGCCCAAGATTTGCGAGGTAGA 285 Query 105994 GGCTGTTGGCATTGGTGCCA 106013 |||||| ||||| || |||| Sbjct 284 GGCTGTGGGCATCGGCGCCA 265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577742186661480