Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_016655.1 Length=51342 Score E Sequences producing significant alignments: (Bits) Value seq655988 134 4e-27 seq1638728 104 8e-18 >seq655988 Length=4118 Score = 134 bits (148), Expect = 4e-27 Identities = 152/201 (76%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 24821 CGGAAAGCTGAGCTGCCAGCTCTACCAGCGCAGCGCGGACGTATTCCTCGGCGTGCCGTT 24880 ||| | ||| || ||||||||||||||||||||||| ||| | ||||| ||| |||| || Sbjct 2716 CGGCACGCTCAGTTGCCAGCTCTACCAGCGCAGCGCCGACATCTTCCTGGGCCTGCCCTT 2657 Query 24881 CAATATCGCGAGCTACGCGCTGCTGACCCATTTCTTCGCGGACCAGCTCGGACTGAAGGT 24940 ||| ||||| ||||||||||||||||||||| | | || | || || || | || Sbjct 2656 CAACATCGCCAGCTACGCGCTGCTGACCCATATGGTGGCCCAGCAATGCGAGTTGGACGT 2597 Query 24941 CGGCGAATTCATCTGGACCGGCGGCGACGTCCACCTGTATTCGAACCACGTCGAGCAGGC 25000 || || |||||||||||||| |||||| ||| | || |||||| || ||||| Sbjct 2596 GGGTGAGTTCATCTGGACCGGTGGCGACTGCCATATCTACGACAACCACCACGCGCAGGT 2537 Query 25001 GACCGA-ACAACTGTCGCGCA 25020 | | || |||||| |||||| Sbjct 2536 G-CAGACCCAACTGGCGCGCA 2517 >seq1638728 Length=450 Score = 104 bits (114), Expect = 8e-18 Identities = 125/168 (74%), Gaps = 4/168 (2%) Strand=Plus/Plus Query 24834 TGCCAGCTCTACCAGCGCAGCGCGGACGTATTCCTCGGCGTGCCGTTCAATATCGCGAGC 24893 ||||||||||| ||||||||||| || | |||||||| |||||||||||||| || | Sbjct 36 TGCCAGCTCTATCAGCGCAGCGCCGATCTGTTCCTCGGGGTGCCGTTCAATATTCCGTCC 95 Query 24894 TACGCGCTGCTGACCCATTTCTTCGCGGACCAGCTCGGACTGAAGGTCGGCGAATTCATC 24953 |||||| |||| ||||| | ||||| | ||| || || || ||||| || | Sbjct 96 TACGCGTTGCTCACCCACATGATCGCGCAACAGACCGACCTCGCCGTTGGCGACCTCGTG 155 Query 24954 TGGACCGGCGGCGACGTCCACCTGTATTCG--AACCACGTCGAGCAGG 24999 ||||||||||| ||| ||| ||| | || || ||| |||| |||| Sbjct 156 TGGACCGGCGGTGACTGCCA--TGTTTACGACAATCACCTCGAACAGG 201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160937465818096