Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq649786 122 1e-22 seq1655424 84.2 3e-11 >seq649786 Length=1608 Score = 122 bits (134), Expect = 1e-22 Identities = 523/826 (63%), Gaps = 27/826 (3%) Strand=Plus/Plus Query 36885 TTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCTAGTGATATATTT 36944 ||||||||||| || || || | || || ||||| || ||||| | | || || | Sbjct 41 TTTTGATATTCGCCCACCCGCTTCTCAAAGAAATTAGTTTTTCCCTGCAAGGAAATCATG 100 Query 36945 TCCATAAAATCAAATGGATTAGATGTATTATATATAGTACTACATGATAATTCCTTCAGA 37004 |||||||| || || ||||| | |||||| | | | | ||| ||| ||| Sbjct 101 TCCATAAAGTCGAAAGGATTGACGGCATTATAAACTTTTTGTCCGGTTAACTCCACCAGC 160 Query 37005 AGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATTAGT 37064 | | || || ||||| ||||| |||| |||||| | || || || |||| Sbjct 161 AAACGGTCTGCCACAAACTCTATATATTGACACATCGAAGCGGCATTCATCCCGATTAAA 220 Query 37065 TTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTATA 37124 | || |||| | ||| | ||| ||||| |||| ||| || ||||| | || Sbjct 221 CTCACGGGAAGCGAATCGGTCACAAACTCCTTTTCAATTACTACGGCGTCTTTGATAATT 280 Query 37125 TTAACAATAACTTCTTCAGTTGGG---GGATATTTTAAATATTTAAACAATAAA---CAT 37178 | |||| || || |||| || | | | | |||| ||||| || Sbjct 281 T---CAATCACCCGCTCTTTTGGCAACGGCTGAATCACGTGTTTAGTATATAAATGACAG 337 Query 37179 GCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCT 37238 |||||||| ||||| || ||||| || | ||||||||||| |||||| | || || Sbjct 338 GCAAAATCGCAATGCAAGCCTTCGTCGCGCGAGATCAATTCATTCGAAAAGCTCAAGCCC 397 Query 37239 GGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAA-GATCCAGAAAAGAAAAT 37297 ||||| | || | ||| || | |||||| | || |||||| || || || |||||||| Sbjct 398 GGCATCAGGCCGCGTTTCTTCAGCCAAAAGA-TGGAGCAAAACGAACCCGAGAAGAAAAT 456 Query 37298 ACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAAT 37357 ||||| || || ||||| || | ||||| |||| Sbjct 457 CCCTTCCACGGCGGCAAAAGCAATCAGACG--------CTCTTGANNNNNNNNNNNNNNN 508 Query 37358 CCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAA 37417 | | |||||| || || ||| || ||||| || |||||||| || | | Sbjct 509 NAA------CGCCCAATCGGCTTTCTTTTTCACGCATTCCATCGTTTCAATGGCGTGAAG 562 Query 37418 GAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTC 37477 ||| || ||| || | ||| | | || |||||||| || | ||| |||| Sbjct 563 CAGACGGTCTTTCTCCTGCGCGTCTTTCACGTAGGTATCAATGAGCAGCGAATAGGTTTC 622 Query 37478 AGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTG 37537 ||||| |||||||||| || || || || || || ||| | ||||||| | |||| Sbjct 623 GGAGTGGATATTTTCAACGGCAATTTGGAAGCCGTAGAAAAATTTAGCTTCCGTATATTG 682 Query 37538 AACAT-CGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAA 37596 || | || | |||| | | || | ||||| || || || || || || || |||| Sbjct 683 CACTTCCGACACAAAATGT-TCCGCCAGATTTTCGTTTACAATTCCGTCGCTGGCGGCAA 741 Query 37597 AGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAATTTTTTCCAATCAT 37656 | || || | ||| | | |||||||||| ||||| | ||| || |||||| | Sbjct 742 AAAACGCCAAAACGTGCGTGATAAAATGTCGCTCATCGTGGTTTAAGCCTTGCCAATCGT 801 Query 37657 TAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGC 37702 | | ||||| |||||||| ||| ||| | |||||||| || || Sbjct 802 TCAAATCTTGACTTAAATCAATTTCTTCAGCCGTCCAAAAGCTGGC 847 >seq1655424 Length=759 Score = 84.2 bits (92), Expect = 3e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 153292 TTTTACATACAAAATTTTGGATAGTTGATAATAAACATGTATATATAGGAAGTGCTAATA 153351 |||| || || ||| |||||||||||||||| |||| || ||| | |||||||| || | Sbjct 340 TTTTGCACACGAAACTTTGGATAGTTGATAAGAAACGAGTTTATGTCGGAAGTGCGAACA 281 Query 153352 TGGATTGGAGATCACTAACTCAAGTA 153377 |||||||||| ||||| || || ||| Sbjct 280 TGGATTGGAGGTCACTGACACAGGTA 255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 580029728473080