Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq307809 244 8e-60 >seq307809 Length=2175 Score = 244 bits (270), Expect = 8e-60 Identities = 426/620 (69%), Gaps = 0/620 (0%) Strand=Plus/Plus Query 29767 GGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAG 29826 ||||| || || |||| | | ||||| ||||| |||||| | ||||| ||| || Sbjct 621 GGAAATGGCCTTGGCTTGCGTTTTAGCTGCTCCTTCAACGGTTCAATGTGATTCAGATAA 680 Query 29827 ACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCC 29886 | ||||| || |||| | |||||| |||||||| ||| ||| || || || ||||| Sbjct 681 ATGTGAGTATCACCCATGTTGTGGATGAACTCTCCTGGTCTTAGTCCAGTCACATGAGCA 740 Query 29887 ATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCC 29946 ||||| || || | | || ||||||||| |||||||| || || ||||| || | || Sbjct 741 ATCATATATGTCAACAAAGCGTAGCTGGCAATGTTAAATGGAACACCGAGACCAACATCT 800 Query 29947 CCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACATG 30006 |||| | |||||| | | | |||||||| ||||||| | || || ||||| || Sbjct 801 GCCGAGCGCTGGTACAACAGGCACGAGAGTTCTCCGTTGGCAACATAGAACTGCACCAGA 860 Query 30007 GTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATG 30066 | |||||| || || || ||||| | | ||||| || ||||| || |||| || Sbjct 861 GCGTGGCATGGTGGCAGCGCCATTTTGGGAAGATCTTTCGGATTCCACGCACACATAATC 920 Query 30067 ATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACC 30126 || || ||||| | ||| | | || || | | | || ||||||||||| Sbjct 921 ATTCGTCTGTCATTTGGTGAACTTTTAATCTTCTCAATCACATCTTTTAGCTGATCCACA 980 Query 30127 CCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGG 30186 ||| ||| | || || |||||| |||| || || || |||| | |||||| Sbjct 981 CCCTGCCCAGTATAATCATGATGCATGTCTTTGTAATCAGCGCCTGAATGACGCCACTGA 1040 Query 30187 AACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAA 30246 || || ||||||||||| ||||| || || || | | | || || | ||||| | Sbjct 1041 AAACCATACACCGGTCCAAGGTCGCCTTCCTCACGATCGTTTAAACCAATTTTGTCGAGG 1100 Query 30247 AAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAG 30306 || ||| || || |||||||||||||| | || ||||| | | ||| |||| Sbjct 1101 AATGCTCGTGAGCCATTGGCGTCCCAGATGTGGACATTTTTCTCAGCCAACTCCTTGGCA 1160 Query 30307 TTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTC 30366 ||||| || |||| | |||||||| |||||| ||||| ||| | ||||| ||||| | | Sbjct 1161 TTTGTTGATCCTCGAATGAACCACAACAGCTCTTCCACAACGCCTTTCCAGAAGACGCGC 1220 Query 30367 TTGGTCGTGAGGAGGGGAAA 30386 || || || || || ||||| Sbjct 1221 TTTGTTGTCAGAAGAGGAAA 1240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 400353110732771