Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_018282.1 Length=61167 Score E Sequences producing significant alignments: (Bits) Value seq642390 120 1e-22 seq1606471 111 6e-20 >seq642390 Length=3645 Score = 120 bits (132), Expect = 1e-22 Identities = 265/386 (69%), Gaps = 16/386 (4%) Strand=Plus/Plus Query 6576 GCCCGGGCGCTGTGGGA-CGCGATCATGCGCGGGACCTGGGATTGGGCGGAGCCGGGCGT 6634 || || ||||||||||| ||| |||||||| | ||| || | || ||||||||| | Sbjct 1278 GCGCGCGCGCTGTGGGAGCGC-ATCATGCGTTCGGCCTACGACTATGCCGAGCCGGGCAT 1336 Query 6635 GCTGTTCATCGACGCGATCAACCGCATGAACAACCTCTGGTACTGCGAGACCATCGCCGC 6694 |||||| | | | |||||| |||||||| ||||||||||||||| | || Sbjct 1337 CCTGTTCCTGGGCCGCATCAACGAGGACAACAACCTGCATTACTGCGAGACCATCACGGC 1396 Query 6695 CACCAACCCCTGCGGTGAGCAACCCCTCCCGCCCTACGGTGCCTGTCTCCTGGGCTCCTT 6754 ||||||||||||||| ||||| ||||| || |||| || ||| ||||||| || | Sbjct 1397 CACCAACCCCTGCGGCGAGCAGCCCCTGCCTGCCTATGGCTGCTGCGACCTGGGCCCCGT 1456 Query 6755 CAACCTGGTCAAGTACAT---CTACAAGGACGGC----GCGG-GCCGCTTCTCCTTCGA- 6805 || |||| | | | | | || ||| |||| ||||| || ||||| Sbjct 1457 CATCCTGCCCCGCTTCGTGCGCCACCCTTTTGGCTTTGGCGGTGCCGCGGCT--TTCGAC 1514 Query 6806 TTGGGACCAGTACCGCGAGGACATCCCGCAAGTGGTCCGGGCGATGGACAACGTGGTTGA 6865 || | | | ||| ||| | | || ||| |||||| ||||||| ||| | || Sbjct 1515 TTCGAGGCTTTCGCGC-AGGCCGTGGCGTTGCAGGTGCGGGCGCTGGACAATGTGCTCGA 1573 Query 6866 TC-GCGCGATCTACCCGCTGCCGCAGCAGAAGCAGGAAGCCAAGGACAAGCGCCGCATGG 6924 | | | || | ||||||||||||||| |||| |||| || |||||||||||| | Sbjct 1574 CCTGACCTAT-TGGCCGCTGCCGCAGCAGCGCGAGGAGGCCATGGCCAAGCGCCGCATCG 1632 Query 6925 GCCTCGGGATCACCGGCCTGGCCAAC 6950 || | || | |||||||||| |||| Sbjct 1633 GCGTGGGCTTTACCGGCCTGGGCAAC 1658 >seq1606471 Length=311 Score = 111 bits (122), Expect = 6e-20 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 6575 CGCCCGGGCGCTGTGGGACGCGATCATGCGCGGGACCTGGGATTGGGCGGAGCCGGGCGT 6634 |||||| ||||||||| | ||||||| | || | |||| || ||||| ||| | Sbjct 276 CGCCCGCCGGCTGTGGGATGTGATCATGTCCTCCACGTATGATTTTGCCGAGCCCGGCTT 217 Query 6635 GCTGTTCATCGACGCGATCAACCGCATGAACAACCTCTGGTACTGCGAGACCATCGCCGC 6694 | |||| || | |||| ||||||||| ||||| |||||| |||||| ||| Sbjct 216 CATCCTCATTGATAAGGTCAATGAGATGAACAACAACTGGTTCTGCGAAACCATCCGCGC 157 Query 6695 CACCAACCCCTGCGGTGAGCAACCCCTCCCGCCCTACGGTGCCTGTCTCCTGGGCTCCTT 6754 ||||||||| || || ||||| || || ||||| || || ||||| || ||||| ||| | Sbjct 156 CACCAACCCTTGTGGCGAGCAGCCGCTGCCGCCTTATGGCGCCTGCCTGCTGGGTTCCAT 97 Query 6755 CAACCTGGTCAAGT 6768 |||| || ||||| Sbjct 96 CAACTTGACCAAGT 83 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 191757881412646