Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq533080 93.3 8e-14 seq1497417 86.0 1e-11 >seq533080 Length=1015 Score = 93.3 bits (102), Expect = 8e-14 Identities = 164/230 (71%), Gaps = 8/230 (3%) Strand=Plus/Plus Query 213738 AATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGG-ATGCGGGACACATGAGGCTCCA 213796 ||||| | ||||| || ||| || || ||||| ||| || |||||| || |||| Sbjct 563 AATTCATCACCCCAAACTTTGTGAAGGCCTGGACACTCATGAGG-ACACATCAGTGTCCA 621 Query 213797 GTCCCCGTCATCTCT-GACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACA 213855 ||| || | |||| ||||| || |||||| | || || | ||| || || ||| | Sbjct 622 GTCACCATTG-CTCTCGACTCGCTTCATGAATAAATCTGGAATCCATAGTGCATAGAATA 680 Query 213856 GGTCCCTGGTCCTC-CT-CTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAA 213913 |||| | || ||| || ||| ||| || | ||||| || ||| ||||||||||| Sbjct 681 GGTCTC--GTGCTCGCTGCTCTTCCTTGCCTGTATTTTTCCGACAATCCAGAAAGTCAAA 738 Query 213914 GATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCT 213963 |||||| || ||||| || |||| ||| |||||||| || || || |||| Sbjct 739 GATGTCGGCATGCCATGGTTCCAGGTAAATGGCAAAAGCACCAGGTCTCT 788 >seq1497417 Length=187 Score = 86.0 bits (94), Expect = 1e-11 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 48215 AGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCG 48274 |||||||||||||| |||||||| || |||||||| || || || || || ||||| || Sbjct 13 AGCCAGAAAATTGCAGCGAAAGATCCGGAGAAGAAAATTCCTTCAACCGCAGCGAAAGCA 72 Query 48275 GTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCC 48334 | | | || || |||||||||| | |||||| |||||||| || ||| Sbjct 73 ACCAAGCGAATGGCAAACGAGGCGTTCTTGTTTTCGATCCACTTGAGCGCCCATTCCGCC 132 Query 48335 TTCTTCTTGATGCATGGCATCGTCTCTATGGC 48366 |||||||| | ||||| | | | || ||||| Sbjct 133 TTCTTCTTTACACATGGAACCATTTCAATGGC 164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 912209002087680