Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_019929.1 Length=243050 Score E Sequences producing significant alignments: (Bits) Value seq1638728 113 7e-20 seq655988 107 3e-18 seq521754 87.8 3e-12 >seq1638728 Length=450 Score = 113 bits (124), Expect = 7e-20 Identities = 186/266 (70%), Gaps = 2/266 (1%) Strand=Plus/Plus Query 123074 TCCTGTCAGCTGTATCAGCGCAGTGCTGACATGTTCCTAGGCGTACCGTTTAACATTGCC 123133 || || ||||| ||||||||||| || || ||||||| || || ||||| || ||| | Sbjct 33 TCGTGCCAGCTCTATCAGCGCAGCGCCGATCTGTTCCTCGGGGTGCCGTTCAATATTCCG 92 Query 123134 TCTTACGCGCTCCTGATACACATGTTTGCCCAGCAGGCCAATATGGCAGTAGGTGACTTC 123193 || |||||| | || | |||||| | || || ||| || | | || || || ||| || Sbjct 93 TCCTACGCGTTGCTCACCCACATGATCGCGCAACAGACCGACCTCGCCGTTGGCGACCTC 152 Query 123194 GTGTGGACGGGTGGGGATGTGCATCTGTACTCCAACCACCTGGAGCAGGCAGATTTGCAG 123253 |||||||| || || || ||| | ||| ||| ||||| || |||| || |||| Sbjct 153 GTGTGGACCGGCGGTGACTGCCATGTTTACGACAATCACCTCGAACAGGTTGACCTGCAA 212 Query 123254 TTAACTCGCGAACC-TCATCCGTTACCACAACTGCGGATTAAACGTCGTCCGGATTCTAT 123312 || | ||| ||||| | |||| ||| |||| || || |||| ||||| Sbjct 213 TTGAGTCGTGAACCGTTCCCCGTGCCCA-GGCTGCACATCGTGCGGAAACCGGCCTCTAT 271 Query 123313 CTTCGACTATAAGTTTGAAGATTTCG 123338 |||||| || |||||||||| |||| Sbjct 272 CTTCGATTACGAGTTTGAAGACTTCG 297 >seq655988 Length=4118 Score = 107 bits (118), Expect = 3e-18 Identities = 167/239 (70%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 122420 GACCGTACGGGCACGGGCACCCTGTCGTTATTCGGCGCACAAATGCGCTTTGACCTGCAA 122479 ||||| || ||||| |||||| | |||||| || ||||||||||| |||| Sbjct 3147 GACCGCACCGGCACCGGCACCAAAAGCCTGTTCGGCCACCAGATGCGCTTTGATCTGCGC 3088 Query 122480 AAAGGTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCCATCATCCATGAGCTT 122539 || || ||||||||||| || || || || |||||| ||||||||| | || || Sbjct 3087 GGGGGCTTTCCGCTGGTCACCACGAAGAAAGTGCACCTCAAATCCATCATCGAAGAACTG 3028 Query 122540 CTGTGGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATC 122599 |||||||||||| ||| ||||| || | ||| | | | ||||| || Sbjct 3027 CTGTGGTTCCTCGCCGGCTCGGGCAACAACCGCTGGCTGCAGCAGCGCGGTGTCAGCATT 2968 Query 122600 TGGGATGAATGGGCAGATGAAGATGGTAATCTCGGCCCGGTGTACGGTAAGCAATGGCG 122658 ||||| |||||||| | ||| || |||| |||||||||||||| ||||||||| Sbjct 2967 TGGGACGAATGGGCGCGCGCAGACGGCGATCTGGGCCCGGTGTACGGCGTGCAATGGCG 2909 Score = 104 bits (114), Expect = 4e-17 Identities = 217/321 (68%), Gaps = 12/321 (4%) Strand=Plus/Minus Query 123077 TGTCAGCTGTATCAGCGCAGTGCTGACATGTTCCTAGGCGTACCGTTTAACATTGCCTCT 123136 || ||||| || |||||||| || ||||| ||||| ||| | || || ||||| ||| Sbjct 2703 TGCCAGCTCTACCAGCGCAGCGCCGACATCTTCCTGGGCCTGCCCTTCAACATCGCCAGC 2644 Query 123137 TACGCGCTCCTGATACACATGTTTGCCCAGCAGGCCAATATGGCAGTAGGTGACTTCGTG 123196 |||||||| |||| || ||| | |||||||| | | ||| || ||||| ||| | Sbjct 2643 TACGCGCTGCTGACCCATATGGTGGCCCAGCAATGCGAGTTGGACGTGGGTGAGTTCATC 2584 Query 123197 TGGACGGGTGGGGATGTGCATCTGTACTCCAACCACCTGGAGCAGGCAGATTTGCAGTT- 123255 ||||| ||||| || ||| | ||| |||||||| | ||||| ||||| Sbjct 2583 TGGACCGGTGGCGACTGCCATATCTACGACAACCACCACGCGCAGG------TGCAGACC 2530 Query 123256 -AACTCGCG---AACCTC-ATCCGTTACCACAACTGCGGATTAAACGTCGTCCGGATTCT 123310 |||| ||| | || | |||| | || || |||| || | || || || || Sbjct 2529 CAACTGGCGCGCAGCCCCTATCCCTACCCGCAGTTGCGCATCAGGCGCCGGCCCGACAGC 2470 Query 123311 ATCTTCGACTATAAGTTTGAAGATTTCGAAGTGGTCGGATACGAATCGCATGACGCTATT 123370 ||||||||||| | ||||||||||| ||| | | ||| || || ||| || Sbjct 2469 ATCTTCGACTACCGCTACGAAGATTTCGAGGTGCTGGACTACCGATGCCACCCCGCGATC 2410 Query 123371 AAGGCACCGGTGGCGATATGA 123391 ||||| || |||||| | ||| Sbjct 2409 AAGGCGCCAGTGGCGGTCTGA 2389 >seq521754 Length=2664 Score = 87.8 bits (96), Expect = 3e-12 Identities = 59/65 (91%), Gaps = 1/65 (2%) Strand=Plus/Plus Query 169732 TGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAGCCCC 169791 |||||| |||| ||| ||| | |||||||||||||||||||||||||||||||||| ||| Sbjct 1873 TGTAGCGCAGTCGGT-TAGCGCGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAGTCCC 1931 Query 169792 GTCAG 169796 ||||| Sbjct 1932 GTCAG 1936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 761500733749200