Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_020081.2 Length=149844 Score E Sequences producing significant alignments: (Bits) Value seq439340 86.0 6e-12 seq307809 86.0 6e-12 >seq439340 Length=4976 Score = 86.0 bits (94), Expect = 6e-12 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 122068 TCGAACCTCCGACACAGGGATTTTCAGCCCCCTGCTCTACCGACTGAGCTACCAGTCCAA 122127 ||||||| |||||||| |||||||||| || |||||||||||||||||||||| | |||| Sbjct 1036 TCGAACCACCGACACAAGGATTTTCAGTCCTCTGCTCTACCGACTGAGCTACCGGGCCAA 1095 Query 122128 GG 122129 || Sbjct 1096 GG 1097 >seq307809 Length=2175 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 137598 TGTATCAAAGATCCGCAGATGCCGCACTTGGAGTACCCTTTAACATTGCAAGCTACGCAC 137657 |||| || | || ||||||| | || || || || ||||||||||| |||||||| Sbjct 816 TGTACCAGCGCTCGGCAGATGTTGGTCTCGGTGTTCCATTTAACATTGCCAGCTACGCTT 757 Query 137658 TATTGACTCACCTTATCGCAGAGATGACAGGACTAAAACCCGGAAAATTCATCCACACCT 137717 | ||||| | | || || | |||| ||||||| ||| ||| | |||||||||| | Sbjct 756 TGTTGACATATATGATTGCTCATGTGACTGGACTAAGACCAGGAGAGTTCATCCACAACA 697 Query 137718 TCGGTGACGCTCACATTTACAGTAATCATCTTGAA 137752 | ||||| |||||||||| ||||| ||||| Sbjct 696 TGGGTGATACTCACATTTATCTGAATCACATTGAA 662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 469428648691680