Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq251356 131 1e-24 >seq251356 Length=4137 Score = 131 bits (144), Expect = 1e-24 Identities = 211/300 (70%), Gaps = 4/300 (1%) Strand=Plus/Plus Query 475875 TTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGA 475934 |||| || | || || | ||| || || | || |||||||||||||||| | |||| Sbjct 929 TTGTGCTGCTGGATGTTAATCCTCTGACAATGGGCATTGAAACAGTTGGAGGCGTCATGA 988 Query 475935 CTAATCTTATTGACAGAAATACTCCTA-TCCCATGCAAA-AAATCAAAAGTATTTTCCAC 475992 |||| || |||| | ||||| || ||||| |||| || || | | ||||| || Sbjct 989 CTAAGCTGATTGGTCGTAATACAGTTATTCCCA--CAAAGAAGTCGCAGATCTTTTCTAC 1046 Query 475993 TTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCAC 476052 | | || ||||| |||||||||| ||||| | ||||||||||| | | | || Sbjct 1047 AGCTGCCGACAATCAGCCAACTGTAACAATCCAGGTGTTTGAAGGTGAGCGTCCAATGAC 1106 Query 476053 TAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGG 476112 ||||| || || ||||| | ||| | || || || || |||| || |||| Sbjct 1107 CAAAGACAACCACCTTCTTGGTAAGTTTGACCTGACCGGAATCCCAGCTGCACCTCGAGG 1166 Query 476113 AGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTGC 476172 |||||| |||||||| ||||||||||| ||||||| ||||| |||||| ||| || || Sbjct 1167 AGTTCCACAAATTGAGGTTACTTTTGAAATTGATGTGAATGGAATTCTTCGTGTCACGGC 1226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3196994034944996