Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_020205.1 Length=42963 Score E Sequences producing significant alignments: (Bits) Value seq532148 167 6e-37 seq643591 93.3 1e-14 >seq532148 Length=3883 Score = 167 bits (184), Expect = 6e-37 Identities = 262/363 (72%), Gaps = 14/363 (4%) Strand=Plus/Minus Query 472 ATCGAATGGACCGACGCCACGTTCAATCCGTGGATCGGCTGCACCAAAATCAG--CCCGG 529 ||||||||||| || || ||||| || ||| || ||| | ||| ||| ||||| Sbjct 379 ATCGAATGGACACACCATACCTTCAACCCCTGGGAAGGTTGC-CAAAAGACAGGCCCCGG 321 Query 530 CGTGTGACCACTGCTACGCCA--GCGTG---TCCACGCCCACGCGCCGGTTCGGCG-TGA 583 | || || |||||||| ||| || | | | ||| |||| || |||| | | Sbjct 320 C-TGCGAGCACTGCTATGCCGAGGCACGCAATGCGCGCTTTGGCGCAGGCCGGGCGGTCA 262 Query 584 AGTGGGGCGCAGGCGAGGAACGCCGCCGCACC-GCGCCTTCGAACTGGCAGCTGCCGCTG 642 | |||||| | |||| ||||| |||||| |||| | | ||||||| ||||||| Sbjct 261 ATTGGGGCCCTGGCGCCCCGCGCCGGCGCACCAGCGC-TGCCAACTGGCGCAAGCCGCTG 203 Query 643 CGGTGGAACGCGCAGCACGATCAGTTCTTCGCGGAGAACGGCCGGCGTCGCCGCGTGTTC 702 ||||| ||| |||| || ||||| || | | | ||| | || | || ||||| Sbjct 202 GCCTGGAATGCGAAGCATGAAGCCTTCTTTGCCGCGCATGGCTGCCGCCAGCGGGTGTTT 143 Query 703 TGCGCGAGCCTGGCCGACGTGTTCGACAACGAAGTGGACCCGTCGTGGCGCGCCGACCTG 762 ||||| ||||||||||| ||||||||||||| |||||| | ||||||||||||||| Sbjct 142 TGCGCCAGCCTGGCCGATGTGTTCGACAACGCGGTGGACAGCGCATGGCGCGCCGACCTG 83 Query 763 TTCGCGTT-GATCGAAGCCACGCCGAACCTGGACTGGCTGCTGCTGACCAAGCGCATCGG 821 || ||| | |||| || ||||| ||||| |||||| ||||||||||||||||||| || Sbjct 82 TT-GCGCTCGATCATGGCAACGCCAAACCTTGACTGGTTGCTGCTGACCAAGCGCATTGG 24 Query 822 CAA 824 ||| Sbjct 23 CAA 21 >seq643591 Length=1265 Score = 93.3 bits (102), Expect = 1e-14 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 1135 GATTGGGTGATCGTAGGTGGCGAAAGCGGCCATGGCGCCAGGCCCATGAACCCTACGTGG 1194 || ||||||||||| || ||||||||||||| ||||| | || ||| |||| ||| Sbjct 213 GACTGGGTGATCGTCGGCGGCGAAAGCGGCCCCGGCGCGCGCCCGATGCACCCGGACTGG 272 Query 1195 GCGCGATTCCTGCGCGATCAGTGCGAAGCCGCTGGCGTGCCTTTCCTGTTCAAGCAGTGG 1254 || || ||||||||| || ||| | | ||| || ||||| ||| | |||||||| ||| Sbjct 273 GCACGCAGCCTGCGCGACCAATGCCAGGGCGCCGGGGTGCCGTTCTTTTTCAAGCAATGG 332 Query 1255 GGCGAATGG 1263 || ||||| Sbjct 333 GGGCAATGG 341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134653062533950