Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_020486.1 Length=171211 Score E Sequences producing significant alignments: (Bits) Value seq1657888 86.0 7e-12 seq1428625 84.2 2e-11 seq508022 82.4 8e-11 >seq1657888 Length=995 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 157690 CGGGGTGTAGCGCAGCTTGGTAGCGCGGTTGCTTTGGGAGCAATAGGTCGCAGGTTCGAA 157749 ||||| ||||| ||||||||||| ||| ||||||||||| | |||||||||||||| Sbjct 779 CGGGGCGTAGCTCAGCTTGGTAGAGCGCCCGCTTTGGGAGCGGGAAGTCGCAGGTTCGAA 838 Query 157750 TCCTGTCACCCCGAC 157764 ||||||| ||||||| Sbjct 839 TCCTGTCGCCCCGAC 853 >seq1428625 Length=160 Score = 84.2 bits (92), Expect = 2e-11 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 156614 GTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGGTTCGAGTCCTGT 156673 |||||||||| ||||||||||| ||||||||||| |||||||||||||||| |||||| Sbjct 4 GTAGCTCAGTCGGATAGAGCAATCGCCTTCTAAGCGATCGGTCACAGGTTCGAATCCTGT 63 Query 156674 C 156674 | Sbjct 64 C 64 >seq508022 Length=5004 Score = 82.4 bits (90), Expect = 8e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 157690 CGGGGTGTAGCGCAGCTTGGTAGCGCGGTTGCTTTGGGAGCAATAGGTCGCAGGTTCGAA 157749 |||||||| |||||||||||||||||| | || |||| | ||| ||||||||| || Sbjct 3795 CGGGGTGTGGCGCAGCTTGGTAGCGCGCGTCGTTCGGGACGACGAGGCCGCAGGTTCAAA 3854 Query 157750 TCCTGTCACCCCGAC 157764 ||||||||||||||| Sbjct 3855 TCCTGTCACCCCGAC 3869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 536384684155320