Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_020840.1 Length=38987 Score E Sequences producing significant alignments: (Bits) Value seq532148 210 5e-50 seq643591 95.1 3e-15 >seq532148 Length=3883 Score = 210 bits (232), Expect = 5e-50 Identities = 273/371 (74%), Gaps = 10/371 (3%) Strand=Plus/Minus Query 11365 CCGCCATTGAATGGACTGACCACACGTTTAACCCCTGGGAGGGCTGCCAGAAGGTGGGAC 11424 || |||| |||||||| |||| || || ||||||||||| || ||||| ||| || | Sbjct 384 CCCCCATCGAATGGACACACCATACCTTCAACCCCTGGGAAGGTTGCCAAAAGACAGGCC 325 Query 11425 CCGGGTGTGACAATTGCTATGCCGAGGCGCGCAATGCCCGTTTCGGTGGGGGCACGGCGC 11484 |||| || || | |||||||||||||| |||||||| || || || | ||| |||| Sbjct 324 CCGGCTGCGAGCACTGCTATGCCGAGGCACGCAATGCGCGCTTTGGCGCAGGCCGGGCGG 265 Query 11485 CAAACTGGGGACCAGGAGCCCCGCGCCGTCTCACCTCCAAGGCCAATTGGCGCGCACCGC 11544 || ||||| || || ||||||||||| | |||| | ||||| |||||| |||| Sbjct 264 TCAATTGGGGCCCTGGCGCCCCGCGCCGGCGCACCAGCGCTGCCAACTGGCGCAAGCCGC 205 Query 11545 TCAAATGG---GCCAAGCGCGCGGCCGAATTCCAGGCAGAGCACGGACGGCGCCAGCGCG 11601 | ||| || |||| | ||| ||| || | ||| || | |||||||| | Sbjct 204 TGGCCTGGAATGCGAAGCATGAAGCC---TTCTTTGCCGCGCATGGCTGCCGCCAGCGGG 148 Query 11602 TCTTTTGCGCCAGCCTGGCTGATGTGTTTGACAATGCCGTGGACCCGGCCTGGCGCGCTG 11661 | ||||||||||||||||| |||||||| ||||| || |||||| || |||||||| | Sbjct 147 TGTTTTGCGCCAGCCTGGCCGATGTGTTCGACAACGCGGTGGACAGCGCATGGCGCGCCG 88 Query 11662 ACCTATTCGAGCTC-ATCA-GGCAGACCCCAGAGCTGGACTGGCTCCTCCTCACAAAGCG 11719 |||| || | |||| |||| |||| || ||| | || |||||| | || || || ||||| Sbjct 87 ACCTGTT-GCGCTCGATCATGGCA-ACGCCAAACCTTGACTGGTTGCTGCTGACCAAGCG 30 Query 11720 CGTGGGCAATG 11730 | | ||||||| Sbjct 29 CATTGGCAATG 19 >seq643591 Length=1265 Score = 95.1 bits (104), Expect = 3e-15 Identities = 101/131 (77%), Gaps = 2/131 (2%) Strand=Plus/Plus Query 11916 GACTGGGTCATCTGTGGTGGCGAGAGCGGCGATGGCGCCCGGCCGATGCACCCAGAGTGG 11975 |||||||| ||| || ||||| |||||| ||||| || ||||||||||| || ||| Sbjct 213 GACTGGGTGATCGTCGGCGGCGAAAGCGGCCCCGGCGCGCGCCCGATGCACCCGGACTGG 272 Query 11976 GCCAGGCAG-GTGCGTGACCAGTGCGCGGCCGCTGATGTGCCGTTCCTGTTTAAGCAATG 12034 | || |||| |||| ||||| ||| || ||| | ||||||||| | || |||||||| Sbjct 273 G-CACGCAGCCTGCGCGACCAATGCCAGGGCGCCGGGGTGCCGTTCTTTTTCAAGCAATG 331 Query 12035 GGGGGACTGGC 12045 |||| | |||| Sbjct 332 GGGGCAATGGC 342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122180597149326