Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_021298.1 Length=51252 Score E Sequences producing significant alignments: (Bits) Value seq644464 396 9e-106 seq653325 183 1e-41 >seq644464 Length=2640 Score = 396 bits (438), Expect = 9e-106 Identities = 665/957 (69%), Gaps = 4/957 (0%) Strand=Plus/Minus Query 39270 AGGACCCGAAGGCCCATGCGCCGAGACTCGCCGAGGTACGTGGCCATCTTGTTCTTGTCG 39329 || ||||||| ||||| || ||| ||||| ||| ||| || | || | | | | Sbjct 2145 AGCACCCGAATCCCCATCCGGCGACACTCGTTGAGATACACTGCTAGTTTATCCCGGGCA 2086 Query 39330 TCGCCCACCGAGGTGAGCGCAGCCGCCATGTACTCGGCTGGGTAGTGCGTCTTCAGCCAC 39389 || || || |||||| || ||||| || || || || || |||| |||||| || Sbjct 2085 TCCCCGACGCTCGTGAGCAATGCTGCCATATATTCTGCAGGATAATGCGCCTTCAGATAC 2026 Query 39390 GCCGTGCGGTACGCGATGAGTCCGTACGCCGCCGAGTGCGCCTTGTTGAAGGCGTAGCCA 39449 ||||| | || || | ||||| || |||||||| |||||||| || || || || Sbjct 2025 GCCGTCCAATAACTGAGCACACCGTAGGCTGCCGAGTGAGCCTTGTTAAACGCATAATCA 1966 Query 39450 GCGAACGGGACCAGCACGTCCCACACTGCCTGGATGGCACCGTCCGAGTAGCCTCGCTCG 39509 | |||||| | ||| | |||||||| || || | || | || || | || | | Sbjct 1965 GAGAACGGCAACAGGATGTCCCACAGTGTCTTTACTGCGTCTTCAGAAAAACCATTCGTG 1906 Query 39510 CGCGCTCCCTTCTGGAAGTTCA-CGAACTCCTTGGCCAGAACCTCGGGCTTCTTCTTGCC 39568 || | || ||| || ||| || ||| || | || | || ||| ||||| || Sbjct 1905 -GCCATACCGGCTGCAAAATCAGCGTACTGTTTATCGAGCTCTTCTTTCTTTTTCTTTCC 1847 Query 39569 CATCGCCCGGCGAAGCAGGTCGGCCTGACCGAGGGTGTACCCGGCCATGACCTGCGCAAC 39628 ||| || || || || | || || || ||||| | | | || || | ||| |||| Sbjct 1846 CATTGCGCGCCGCAGAATATCAGCTTGGCCGAGTGAGAATCCCGCTACCCGCTGTGCAAT 1787 Query 39629 CTTCTGCACCTGCTCCTGGTAGATGATGAGCTGGAAGGTCGGGTCCAGGATCTCCGACAG 39688 | | ||||| |||||||| ||||||||| | |||| | |||||||| || || Sbjct 1786 CGCCATAACCTGTTCCTGGTAAATGATGAGCCCGTAGGTGGTATCCAGGATGTCTCGCAA 1727 Query 39689 GGACTCGGCCACCTCGGGGTGGATCGGCGTGATCGCCTGCTGCCCGTTCTTACGGAGGGC 39748 | ||| |||| ||||| || ||||||||| | | || ||||| ||||| || || || Sbjct 1726 CGGCTCCGCCAGTTCGGGATGAATCGGCGTGTTTTCTTGTTGCCCATTCTTGCGCAGCGC 1667 Query 39749 GTAGTTCGTGTGAGACCCCACGCCCATCGGACCCGGACGGTACAGCGCGACGACGGCCGA 39808 |||||||||||| || | | |||||||||||||| ||||||| ||||| || || || Sbjct 1666 GTAGTTCGTGTGTGAATTCGCCCCCATCGGACCCGGTCGGTACAACGCGATAACCGCGGA 1607 Query 39809 GATGTCCTCGAAGTTGTCCGGCTTCAGCAGACGGAGCAGTGAGCGCATCGCGCCGCCGTC 39868 |||||||||||| ||||||| |||| || || ||||||| ||||||| |||||||| Sbjct 1606 AATGTCCTCGAAGGTGTCCGGTTTCAACAATCGCAGCAGTGCCCGCATCGGACCGCCGTC 1547 Query 39869 GAGCTGGAAGACCGAGAGCGTGTCGCCCCTGGCCAGCAGCTCGTACGTCGCGGGGTCGTC 39928 ||||||||| || ||| ||||| |||| ||| |||||| |||| | | ||||| || Sbjct 1546 GAGCTGGAATACGCCGAGTGTGTCACCCCGGGCGAGCAGCGCGTAGGCGTCCGGGTCATC 1487 Query 39929 CAGGGGGATGTTCTCCAGGTCGACGTGCTCCCCACGGTT-GAGGCGGATGTTCTCGACCG 39987 ||| | | | ||||| || |||| | ||||| ||||| | || |||| || Sbjct 1486 CAGTGCCAGCTCTTCCAGCACGGGTCGCTCGCTGCGGTTGGAGGC-AACATTGTCGAGCG 1428 Query 39988 CGTCGCCCATGATCGTGAGGTTCCGGAGCCCGAGGAAGTCCATCTTCAGCAGGCCCAGAG 40047 |||| | || ||||||||||| || |||||||| ||||||||||||| ||||| || | Sbjct 1427 CGTCATCGATAATCGTGAGGTTTCGCAGCCCGAGAAAGTCCATCTTCATAAGGCCGAGCG 1368 Query 40048 CCTCGCAGCTCGGGTAGTCGAACTGCGTGATCGTCGCGCCGTCCTGCGGTCGCACCCACA 40107 ||||||| ||| |||| ||||| |||| | ||||||||| || | | Sbjct 1367 CCTCGCACGACGGAAAGTCAAACTGGGTGACGATTTGGCCGTCCTGTTCCCGTTTCATAA 1308 Query 40108 CCGGGATGTGGTCGACCAGAGGCTCGTCGGACATGATCACACCGGCTGCGTGCACACCCA 40167 ||||||| ||| | || || || |||||||| |||||||| |||||||||||| Sbjct 1307 TCGGGATGATGTCAATGAGCGGATCACTCGACATGATGACACCGGCCGCGTGCACACCCC 1248 Query 40168 TCTGCCGGACGAGACCTTCGAGACCGAGCGCGGTGTCGATGACCTCCTTGGCGTCCG 40224 ||| || || ||| | || | |||||||| | ||| |||||| |||| Sbjct 1247 ACTGTCGCTTAAGGTTTTCTAACCCAACGGCGGTGTCAAACACCGTCTTGGCATCCG 1191 Score = 183 bits (202), Expect = 1e-41 Identities = 200/266 (75%), Gaps = 0/266 (0%) Strand=Plus/Minus Query 40476 ATCACCTCGCCACGACGCCGGTCATCGAAGTCGATGTCGACATCGGGCATGGACACGCGC 40535 || ||||| || || || || || || || |||| |||| |||||||| || || || Sbjct 993 ATAACCTCACCCCGTCGGCGCTCGTCAAAATCGACATCGAAGTCGGGCATTGAGACACGA 934 Query 40536 TCGGGGTTCAGGAACCGCTCGAAGATGAGTCCGTGCTCCAGCGGGTCGAGGTCGGTGATC 40595 || ||||| ||||| || ||||||||||| ||||| || |||||||||||||| |||||| Sbjct 933 TCCGGGTTGAGGAAGCGTTCGAAGATGAGACCGTGTTCAAGCGGGTCGAGGTCAGTGATC 874 Query 40596 CCGAGGACGTAGGCGACCAGCGAACCGGCCGCAGAGCCTCGCCCAGGGCCGACCCAGACG 40655 | | | |||| ||| ||| |||||||| |||| || || || ||||| || | | Sbjct 873 CGCATGGCGTACGCGGCCATTGAACCGGCACCAGACCCGCGGCCCGGGCCCACTCGAATT 814 Query 40656 CCGTTCTCCTTCGCCCAGCGGATGAAGTCCGCGACGACGAGGAAGTACGACGGGAAGCCC 40715 || || | ||||| |||| ||||| |||||||| ||||||||||| ||||| ||| Sbjct 813 CCATTGTTCTTCGACCAGTTAATGAAATCCGCGACAACGAGGAAGTAGCCGGGGAACCCC 754 Query 40716 ATCTGGATGATCATGTCGATCTCGTA 40741 ||||| |||| | || | |||||| Sbjct 753 ATCTGAGTGATGACCTCAACCTCGTA 728 >seq653325 Length=6560 Score = 183 bits (202), Expect = 1e-41 Identities = 185/241 (77%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 40503 AAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGATG 40562 || |||||||||| || ||||| || || || |||||||||||||| |||||||| | Sbjct 1064 AAATCGATGTCGAAGTCCGGCATCGATACCCGTTCGGGGTTCAGGAAGCGCTCGAACAGC 1005 Query 40563 AGTCCGTGCTCCAGCGGGTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACCG 40622 ||| || |||||||||||||||||||||||||| | | | ||||| |||||||| ||| Sbjct 1004 AGTTTGTATTCCAGCGGGTCGAGGTCGGTGATCCCCATGGCATAGGCCACCAGCGAGCCG 945 Query 40623 GCCGCAGAGCCTCGCCCAGGGCCGACCCAGACGCCGTTCTCCTTCGCCCAGCGGATGAAG 40682 || | || || ||||| || |||||| | ||| || | | | ||||| | |||||| Sbjct 944 GCGCCGGAACCGCGCCCCGGCCCGACCGGGCAGCCATTGTTCCTGGCCCACTGTATGAAG 885 Query 40683 TCCGCGACGACGAGGAAGTACGACGGGAAGCCCATCTGGATGATCATGTCGATCTCGTAC 40742 ||| |||||| |||||||| || |||||||||| || ||| | |||||||| || Sbjct 884 TCCCCGACGATCAGGAAGTAGCCCGCAAAGCCCATCTCGACGATGGTCCCGATCTCGAAC 825 Query 40743 T 40743 | Sbjct 824 T 824 Score = 122 bits (134), Expect = 3e-23 Identities = 220/318 (69%), Gaps = 4/318 (1%) Strand=Plus/Minus Query 39361 ACTCGGCTGGGTAGTGCGTCTTCAGCCACGCCGTGCGGTACGCGATGAGTCCGTACGCCG 39420 ||||||| | ||| ||| ||||||||| ||||| |||| || | || ||| || | Sbjct 2209 ACTCGGCCGTGTAATGCACCTTCAGCCAGCCCGTGTGGTAGGCCAGCAGGGAGTAAGCGG 2150 Query 39421 CCGAGTGCGCCTTGTTGAAGGCGTAGCCAGCGAACGGGACCAGCACGTCCCACACTGCCT 39480 | | ||||| |||||||||| ||||||| || ||| ||| || ||| |||| | | Sbjct 2149 CAGCGTGCGACTTGTTGAAGCCGTAGCCGGCAAACTTCTCCATCAGGTCGAACACCTCGT 2090 Query 39481 -GGATGGCACC-GTCCGAGTAGCCTCGCTCGCGCGCTCCCTTCTGGAAGTTCACGAACTC 39538 || | | || | | |||| ||| || ||| ||||| ||||| | || | Sbjct 2089 CGGCTTTCTCCTGGCTGAGT--CCTTTTTCCGCCGCCCCCTTGCGGAAGATGGCGCGGTG 2032 Query 39539 CTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATCGCCCGGCGAAGCAGGTCGGCCTGACC 39598 || ||||| |||||| || ||||||||||| |||||||| |||| |||||| || Sbjct 2031 CTCGGCCATCTCCTCGGCTTTTTTCTTGCCCATGGCCCGGCGCAGCATGTCGGCGCCGCC 1972 Query 39599 GAGGGTGTACCCGGCCATGACCTGCGCAACCTTCTGCACCTGCTCCTGGTAGATGATGAG 39658 ||| |||| ||| | | | ||| || || | ||||||||||||||||| |||| Sbjct 1971 CAGGCTGTAGCCGCCGAGCAACTGGGCGGTCTGCATCACCTGCTCCTGGTAGACCATGAT 1912 Query 39659 CTGGAAGGTCGGGTCCAG 39676 | | ||||| | |||| Sbjct 1911 CCCGTAGGTCTCGGCCAG 1894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160655141400436