Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_021304.1 Length=51552 Score E Sequences producing significant alignments: (Bits) Value seq644464 396 9e-106 seq653325 178 4e-40 >seq644464 Length=2640 Score = 396 bits (438), Expect = 9e-106 Identities = 665/957 (69%), Gaps = 4/957 (0%) Strand=Plus/Minus Query 39558 AGGACCCGCAGGCCCATGCGCCGAGACTCGCCGAGGTACGTGGCCATCTTGTTCTTGTCG 39617 || ||||| | ||||| || ||| ||||| ||| ||| || | || | | | | Sbjct 2145 AGCACCCGAATCCCCATCCGGCGACACTCGTTGAGATACACTGCTAGTTTATCCCGGGCA 2086 Query 39618 TCGCCCACCGAGGTGAGCGCAGCCGCCATGTACTCGGCTGGGTAGTGCGTCTTCAGCCAC 39677 || || || |||||| || ||||| || || || || || |||| |||||| || Sbjct 2085 TCCCCGACGCTCGTGAGCAATGCTGCCATATATTCTGCAGGATAATGCGCCTTCAGATAC 2026 Query 39678 GCCGTGCGGTACGCGATGAGTCCGTACGCCGCCGAGTGCGCCTTGTTGAAGGCGTAGCCA 39737 ||||| | || || | ||||| || |||||||| |||||||| || || || || Sbjct 2025 GCCGTCCAATAACTGAGCACACCGTAGGCTGCCGAGTGAGCCTTGTTAAACGCATAATCA 1966 Query 39738 GCGAACGGGACCAGCACGTCCCACACTGCCTGGATGGCACCGTCCGAGTAGCCTCGCTCG 39797 | |||||| | ||| | |||||||| || || | || | || || | || | | Sbjct 1965 GAGAACGGCAACAGGATGTCCCACAGTGTCTTTACTGCGTCTTCAGAAAAACCATTCGTG 1906 Query 39798 CGCGCTCCCTTCTGGAAGTTCA-CGAACTCCTTGGCCAGAACCTCGGGCTTCTTCTTGCC 39856 || | || ||| || ||| || ||| || | || | || ||| ||||| || Sbjct 1905 -GCCATACCGGCTGCAAAATCAGCGTACTGTTTATCGAGCTCTTCTTTCTTTTTCTTTCC 1847 Query 39857 CATCGCCCGGCGAAGCAGGTCGGCCTGACCGAGGGTGTACCCGGCCATGACCTGTGCAAC 39916 ||| || || || || | || || || ||||| | | | || || | |||||||| Sbjct 1846 CATTGCGCGCCGCAGAATATCAGCTTGGCCGAGTGAGAATCCCGCTACCCGCTGTGCAAT 1787 Query 39917 CTTCTGCACTTGCTCCTGGTAGATGATGAGCTGGAAGGTCGGGTCCAGGATCTCCGACAG 39976 | | || || |||||||| ||||||||| | |||| | |||||||| || || Sbjct 1786 CGCCATAACCTGTTCCTGGTAAATGATGAGCCCGTAGGTGGTATCCAGGATGTCTCGCAA 1727 Query 39977 GGACTCGGCCACCTCGGGGTGGATCGGCGTGATCGCCTGCTGCCCGTTCTTCCGGAGGGC 40036 | ||| |||| ||||| || ||||||||| | | || ||||| ||||| || || || Sbjct 1726 CGGCTCCGCCAGTTCGGGATGAATCGGCGTGTTTTCTTGTTGCCCATTCTTGCGCAGCGC 1667 Query 40037 GTAGTTCGTGTGAGACCCCACGCCCATCGGACCAGGACGGTACAGCGCGACGACGGCCGA 40096 |||||||||||| || | | ||||||||||| || ||||||| ||||| || || || Sbjct 1666 GTAGTTCGTGTGTGAATTCGCCCCCATCGGACCCGGTCGGTACAACGCGATAACCGCGGA 1607 Query 40097 GATGTCCTCGAAGTTGTCCGGCTTCAGCAGACGGAGCAGTGAGCGCATCGCGCCGCCGTC 40156 |||||||||||| ||||||| |||| || || ||||||| ||||||| |||||||| Sbjct 1606 AATGTCCTCGAAGGTGTCCGGTTTCAACAATCGCAGCAGTGCCCGCATCGGACCGCCGTC 1547 Query 40157 GAGCTGGAAGACCGAGAGCGTGTCGCCCCTGGCCAGCAGCTCGTACGTCGCGGGGTCGTC 40216 ||||||||| || ||| ||||| |||| ||| |||||| |||| | | ||||| || Sbjct 1546 GAGCTGGAATACGCCGAGTGTGTCACCCCGGGCGAGCAGCGCGTAGGCGTCCGGGTCATC 1487 Query 40217 CAGGGGGATGTTCTCCAGGTCGACGTGCTCCCCACGGTT-GAGGCGGATGTTCTCGACCG 40275 ||| | | | ||||| || |||| | ||||| ||||| | || |||| || Sbjct 1486 CAGTGCCAGCTCTTCCAGCACGGGTCGCTCGCTGCGGTTGGAGGC-AACATTGTCGAGCG 1428 Query 40276 CGTCGCCCATGATCGTGAGGTTCCGGAGCCCGAGGAAGTCCATCTTCAGCAGGCCCAGAG 40335 |||| | || ||||||||||| || |||||||| ||||||||||||| ||||| || | Sbjct 1427 CGTCATCGATAATCGTGAGGTTTCGCAGCCCGAGAAAGTCCATCTTCATAAGGCCGAGCG 1368 Query 40336 CCTCGCAGCTCGGGTAGTCGAACTGCGTGATCGTCGCGCCGTCCTGCGGCCGAACCCACA 40395 ||||||| ||| |||| ||||| |||| | ||||||||| ||| | | Sbjct 1367 CCTCGCACGACGGAAAGTCAAACTGGGTGACGATTTGGCCGTCCTGTTCCCGTTTCATAA 1308 Query 40396 CCGGGATGTGGTCGACCAGCGGCTCGTCGGACATGATCACACCGGCTGCGTGCACACCCA 40455 ||||||| ||| | ||||| || |||||||| |||||||| |||||||||||| Sbjct 1307 TCGGGATGATGTCAATGAGCGGATCACTCGACATGATGACACCGGCCGCGTGCACACCCC 1248 Query 40456 TCTGCCGGACGAGACCTTCGAGACCGAGCGCGGTGTCGATGACCTCCTTGGCGTCCG 40512 ||| || || ||| | || | |||||||| | ||| |||||| |||| Sbjct 1247 ACTGTCGCTTAAGGTTTTCTAACCCAACGGCGGTGTCAAACACCGTCTTGGCATCCG 1191 Score = 183 bits (202), Expect = 1e-41 Identities = 200/266 (75%), Gaps = 0/266 (0%) Strand=Plus/Minus Query 40764 ATCACCTCGCCACGACGCCGGTCATCGAAGTCGATGTCGACATCGGGCATGGACACGCGC 40823 || ||||| || || || || || || || |||| |||| |||||||| || || || Sbjct 993 ATAACCTCACCCCGTCGGCGCTCGTCAAAATCGACATCGAAGTCGGGCATTGAGACACGA 934 Query 40824 TCGGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGCTCCAGCGGGTCGAGGTCGGTGATC 40883 || ||||| ||||| || ||||||||||| ||||| || |||||||||||||| |||||| Sbjct 933 TCCGGGTTGAGGAAGCGTTCGAAGATGAGACCGTGTTCAAGCGGGTCGAGGTCAGTGATC 874 Query 40884 CCGAGGACGTAGGCGACCAGCGAACCGGCCGCAGAGCCTCGCCCAGGGCCGACCCAGACG 40943 | | | |||| ||| ||| |||||||| |||| || || || ||||| || | | Sbjct 873 CGCATGGCGTACGCGGCCATTGAACCGGCACCAGACCCGCGGCCCGGGCCCACTCGAATT 814 Query 40944 CCGTTCTCCTTCGCCCAGCGGATGAAGTCCGCGACGACGAGGAAGTACGACGGGAAGCCC 41003 || || | ||||| |||| ||||| |||||||| ||||||||||| ||||| ||| Sbjct 813 CCATTGTTCTTCGACCAGTTAATGAAATCCGCGACAACGAGGAAGTAGCCGGGGAACCCC 754 Query 41004 ATCTGGATGATCATGTCGATCTCGTA 41029 ||||| |||| | || | |||||| Sbjct 753 ATCTGAGTGATGACCTCAACCTCGTA 728 >seq653325 Length=6560 Score = 178 bits (196), Expect = 4e-40 Identities = 184/241 (76%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 40791 AAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGATG 40850 || |||||||||| || ||||| || || || |||||||||||||| |||||||| | Sbjct 1064 AAATCGATGTCGAAGTCCGGCATCGATACCCGTTCGGGGTTCAGGAAGCGCTCGAACAGC 1005 Query 40851 AGCCCGTGCTCCAGCGGGTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACCG 40910 || || |||||||||||||||||||||||||| | | | ||||| |||||||| ||| Sbjct 1004 AGTTTGTATTCCAGCGGGTCGAGGTCGGTGATCCCCATGGCATAGGCCACCAGCGAGCCG 945 Query 40911 GCCGCAGAGCCTCGCCCAGGGCCGACCCAGACGCCGTTCTCCTTCGCCCAGCGGATGAAG 40970 || | || || ||||| || |||||| | ||| || | | | ||||| | |||||| Sbjct 944 GCGCCGGAACCGCGCCCCGGCCCGACCGGGCAGCCATTGTTCCTGGCCCACTGTATGAAG 885 Query 40971 TCCGCGACGACGAGGAAGTACGACGGGAAGCCCATCTGGATGATCATGTCGATCTCGTAC 41030 ||| |||||| |||||||| || |||||||||| || ||| | |||||||| || Sbjct 884 TCCCCGACGATCAGGAAGTAGCCCGCAAAGCCCATCTCGACGATGGTCCCGATCTCGAAC 825 Query 41031 T 41031 | Sbjct 824 T 824 Score = 118 bits (130), Expect = 3e-22 Identities = 219/318 (69%), Gaps = 4/318 (1%) Strand=Plus/Minus Query 39649 ACTCGGCTGGGTAGTGCGTCTTCAGCCACGCCGTGCGGTACGCGATGAGTCCGTACGCCG 39708 ||||||| | ||| ||| ||||||||| ||||| |||| || | || ||| || | Sbjct 2209 ACTCGGCCGTGTAATGCACCTTCAGCCAGCCCGTGTGGTAGGCCAGCAGGGAGTAAGCGG 2150 Query 39709 CCGAGTGCGCCTTGTTGAAGGCGTAGCCAGCGAACGGGACCAGCACGTCCCACACTGCCT 39768 | | ||||| |||||||||| ||||||| || ||| ||| || ||| |||| | | Sbjct 2149 CAGCGTGCGACTTGTTGAAGCCGTAGCCGGCAAACTTCTCCATCAGGTCGAACACCTCGT 2090 Query 39769 -GGATGGCACC-GTCCGAGTAGCCTCGCTCGCGCGCTCCCTTCTGGAAGTTCACGAACTC 39826 || | | || | | |||| ||| || ||| ||||| ||||| | || | Sbjct 2089 CGGCTTTCTCCTGGCTGAGT--CCTTTTTCCGCCGCCCCCTTGCGGAAGATGGCGCGGTG 2032 Query 39827 CTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATCGCCCGGCGAAGCAGGTCGGCCTGACC 39886 || ||||| |||||| || ||||||||||| |||||||| |||| |||||| || Sbjct 2031 CTCGGCCATCTCCTCGGCTTTTTTCTTGCCCATGGCCCGGCGCAGCATGTCGGCGCCGCC 1972 Query 39887 GAGGGTGTACCCGGCCATGACCTGTGCAACCTTCTGCACTTGCTCCTGGTAGATGATGAG 39946 ||| |||| ||| | | | ||| || || | ||| ||||||||||||| |||| Sbjct 1971 CAGGCTGTAGCCGCCGAGCAACTGGGCGGTCTGCATCACCTGCTCCTGGTAGACCATGAT 1912 Query 39947 CTGGAAGGTCGGGTCCAG 39964 | | ||||| | |||| Sbjct 1911 CCCGTAGGTCTCGGCCAG 1894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 161596222792636